Pantoea alfalfae: K6R05_17305
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Entry
K6R05_17305 CDS
T09440
Symbol
ssb1
Name
(GenBank) single-stranded DNA-binding protein SSB1
KO
K03111
single-strand DNA-binding protein
Organism
palf
Pantoea alfalfae
Pathway
palf03030
DNA replication
palf03430
Mismatch repair
palf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K6R05_17305 (ssb1)
03430 Mismatch repair
K6R05_17305 (ssb1)
03440 Homologous recombination
K6R05_17305 (ssb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palf03032
]
K6R05_17305 (ssb1)
03400 DNA repair and recombination proteins [BR:
palf03400
]
K6R05_17305 (ssb1)
03029 Mitochondrial biogenesis [BR:
palf03029
]
K6R05_17305 (ssb1)
DNA replication proteins [BR:
palf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K6R05_17305 (ssb1)
DNA repair and recombination proteins [BR:
palf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
K6R05_17305 (ssb1)
TLS (translesion DNA synthesis) factors
Other SOS response factors
K6R05_17305 (ssb1)
Mitochondrial biogenesis [BR:
palf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
K6R05_17305 (ssb1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSB
OSB_SSB
SSB_1
DUF3127
Phage_attach
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QZX95469
LinkDB
All DBs
Position
complement(3700709..3701263)
Genome browser
AA seq
184 aa
AA seq
DB search
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGENKEITEWHRVVL
FGKLAEVAGEYLKKGSQVYIEGQLRTRKWQDQGGQERYTTEVVVNVGGTMQMLGGRQQGG
NAGAPAGGGAQGGGNNNGWGQPQQPQGNNNQFSGGAQSRPQQPQSAPASSNNEPPMDFDD
DIPF
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgtggcgttaacaaagtgattcttgtcgggaatctgggtcaggatccggaa
gtacgttacatgccaaatggtggcgcggttgccaacattacgctggctacgtcggaaagc
tggcgcgacaagcagaccggtgaaaacaaagagatcactgaatggcaccgtgtggtgctg
tttggcaaactggctgaagtcgcaggcgaatacctgaaaaaagggtcgcaggtctacatc
gaaggtcagctgcgtacccgtaaatggcaggatcagggcggccaggaacgttacaccacc
gaagtcgtggtcaacgttggcggcactatgcagatgctgggtggccgtcagcagggcggc
aacgcgggtgcaccagcaggtggcggcgcgcagggcggtggcaacaacaatggttggggt
cagccgcagcagccgcagggtaacaacaatcagttcagtggtggcgcgcagtcccgtcca
cagcagccacagagcgcgccggccagcagcaacaacgaaccaccaatggatttcgacgac
gatattccattctga
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integrated database retrieval system
