Pantoea alfalfae: K6R05_17910
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Entry
K6R05_17910 CDS
T09440
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
palf
Pantoea alfalfae
Pathway
palf00300
Lysine biosynthesis
palf00470
D-Amino acid metabolism
palf01100
Metabolic pathways
palf01110
Biosynthesis of secondary metabolites
palf01120
Microbial metabolism in diverse environments
palf01230
Biosynthesis of amino acids
Module
palf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K6R05_17910 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K6R05_17910 (dapF)
Enzymes [BR:
palf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
K6R05_17910 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QZX95575
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All DBs
Position
complement(3839369..3840193)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGIGFDQLLIVEPPYDPDLDFHY
RIFNADGSEVAQCGNGARCFARFVQLKGLTNKSDIRVSTQNGRMVLTVTPDDHVRVNMGE
PNFEPQQVPFRANKAENLYLLRVAEQTVMLGAVSMGNPHCVIQVESVKTAQVELLGPILE
SHERFPDRVNVGFMEIINPEHIRLRVYERGAGETQACGSGACAAVACGIQQGILAPKVRV
DLPGGTLHISWKGAGQPLYMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggtctcggcaacgattttatggttgtggatgcagtgaca
caaaacgtcttcttctcgccggaattgatccgccggctggccgatcgtcatctggggatc
ggttttgatcagctgctgattgttgaaccgccttacgatcccgatctcgattttcactat
cgaattttcaacgctgacggcagtgaagtggcgcagtgcggcaacggtgcacgctgtttt
gcccgctttgttcagctgaaagggctgaccaacaaaagcgacatccgggtcagtacccag
aatggccgcatggtgttaaccgtgacgcctgacgatcacgtgcgcgtgaacatgggtgag
cccaactttgagcctcagcaggtgccgttccgcgccaacaaagccgagaatctctatctg
ctgcgcgtggccgaacagacggtgatgctgggtgcagtgtcgatggggaatccccactgc
gtcattcaggtggaaagcgttaaaaccgcgcaggttgaactgctgggcccgattctcgag
agccacgagcgtttcccggatcgcgtcaatgtcggttttatggagatcattaatcccgaa
catatccggctgcgcgtctacgaacgtggagcgggtgaaacgcaggcgtgcggcagcggc
gcctgtgctgccgttgcatgcggcattcagcagggcattctggcaccgaaagtgcgtgtc
gacctgcctggcgggacgctgcatatctcctggaaaggtgccggtcagccgctctacatg
accgggcctgcgacacacgtctacgatgggtttattcatctatga
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