Pantoea alfalfae: K6R05_18095
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Entry
K6R05_18095 CDS
T09440
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
palf
Pantoea alfalfae
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
K6R05_18095 (hmsP)
Enzymes [BR:
palf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
K6R05_18095 (hmsP)
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
Motif
Other DBs
NCBI-ProteinID:
QZX95606
LinkDB
All DBs
Position
complement(3880555..3882561)
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AA seq
668 aa
AA seq
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MRVSRSLTIKQMATVSLVAVITISIFIVIQLFHFVQQRRIDYAQQMENIAHTVRQPLSEA
VLRADISQAERILHSLKPAGILSRADVVLPNAFQALHADFETEKPVPLLVARLFELPVQI
TLPLYSVENTGMPKPLAYLVLQANSTRVYQFILSTLSTMIITYLLLALILSVAISWCINR
LVVHPLRNLSRELQELPPQSILTHKLTLPQSHRDDEIGMLIRSYNRNQQVLESIHDEMSR
LTTHFAVTDLPNRTLFLALVEQFMCNPEQPLGLMVIRIETLQEANGVLRDEQRDTLMLTL
VEKIRHTLDDHTLLAQTGVSDFVLLMKRASNPFRALRLARNLMIRLNQPVNLHQLQLRPN
VSIGLALRDDKPLSANELLDRATSAMMSARHQGKNQILFFDAALTERAQKRLTQEHDILQ
GLHDEQFALYLQPQVDMRTGTLTGAEALLRMRQPDGSYGLTEEFIASAEEIGVISAIGRW
VFEEACRILAGWQRQGIMLPLSVNISAVQLRDTGVVSHLQSLLARHRIAPGTLVLEVTET
AQLDDAEQAMSMLRMLQQTGVAVALDDFGMGYSNLNYLHQLKALPVNKLKMDRSFVAALP
HDDTMVRIVAAIAEIIHLEVIAEGVETAEQRDWLLARGIAIGQGYLYAEALPVSRFNQTW
IEKSSLPQ
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtaagccggtcactaacgataaagcagatggcgacagtttcgctggttgcggtt
atcaccatcagtatctttatcgtcatccaactgtttcattttgtgcagcagcgcaggatt
gactacgcccagcagatggagaatatcgcgcacaccgtccgccagccgctgtcggaagcg
gtgctgcgtgccgatatttctcaggccgaacgcattcttcattcactgaagcctgccggt
attttatcgcgcgccgacgtggtgctgcctaatgcgtttcaggccctgcatgccgacttt
gagacggaaaaaccggtgccgcttctggtggcccgcctgtttgagctgccggtgcagatt
accctgccgctctattcggtcgaaaataccgggatgccgaagccgctggcctatctggtg
ttgcaggctaattcgacgcgcgtctaccagtttatcctcagcacgctctcaaccatgatc
atcacctatctgctgctggcgctgatcctctccgtggcgatcagctggtgcatcaaccgg
ctggtggtgcatccgctgcgcaatctctcacgcgagctgcaggagttgccaccgcagtcg
attctgacgcataaactgaccctgccgcagagccatcgcgatgacgaaatcggcatgctg
atccgcagctacaaccgtaatcagcaggtgctggagtcgattcatgacgagatgagtcgg
ctgaccacccattttgccgtcaccgatctgcctaaccgtacgctgtttcttgcgctggtc
gaacagttcatgtgtaaccctgaacagccactgggtctgatggtgatccgtattgaaacg
ctgcaggaagccaatggcgtcctgcgcgatgagcagcgcgatacgctgatgctgacgctg
gtggagaaaatccggcatacgctggatgaccataccctgctggcacagaccggtgtcagc
gacttcgtgctgttaatgaagcgcgccagtaatccgtttcgtgcgctgcgcctggcgcgc
aacctgatgattcgcctgaatcagccggtcaacctgcatcagctgcagctgcgtcctaac
gtcagcatcggtctggcgctgcgcgacgacaagccgctgagcgctaacgagctgcttgac
cgcgcgacctcggcgatgatgtcggcccgtcatcagggcaaaaatcagatcctgttcttt
gacgccgcgctgaccgagcgcgctcagaagcgtctgacacaggagcatgacattctgcag
gggctgcacgatgagcagttcgccctctacctgcaaccccaggtggatatgcgcaccggt
acgttaaccggcgcagaagcgctgctgcgtatgcgccagcctgatggcagttacggtctg
accgaggagtttattgccagtgctgaagagattggtgtgattagcgcgattggccgctgg
gtgtttgaagaggcgtgccgcattctggctggctggcagcgacagggtattatgctgccg
ctgagtgtgaatatttccgcagtgcaactgcgggataccggcgtagtttctcatctgcaa
tccctgctggcgcgccaccgtatcgcaccaggcactctggtgctggaagtgacagaaacg
gctcagcttgacgatgcggaacaggcgatgtcgatgctgcggatgttgcagcagaccggc
gtggcggtggcgctggatgatttcggtatgggctattctaacctgaactatctccatcag
ctgaaagcgttgccggttaacaaactgaagatggatcgcagctttgtggcggcactgccg
catgacgacaccatggtccgcatcgtggcggctatcgccgaaattatccatctggaggtg
attgccgaaggtgtggaaacggcggagcagcgcgactggctgctggcgcgcggcatcgct
atcggtcagggctacctctatgcggaagcgctgccggtgagccgcttcaaccagacctgg
atcgaaaaatcctcactgccgcaataa
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