Pantoea alfalfae: K6R05_19260
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Entry
K6R05_19260 CDS
T09440
Name
(GenBank) HAMP domain-containing protein
KO
K05875
methyl-accepting chemotaxis protein II, aspartate sensor receptor
Organism
palf
Pantoea alfalfae
Pathway
palf02020
Two-component system
palf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6R05_19260
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
K6R05_19260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
palf02035
]
K6R05_19260
Bacterial motility proteins [BR:
palf02035
]
Flagellar system
Chemotaxis proteins
MCPs
K6R05_19260
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
HAMP_2
Fib_alpha
Motif
Other DBs
NCBI-ProteinID:
QZX97573
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All DBs
Position
p1_CQ10:complement(170110..172026)
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AA seq
638 aa
AA seq
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MNIIKKVTDLKIGGKLALGFTLVILASVIIAALAFRCFLSIQENSAKRDVTVQMLDTLAK
ARLNRTLFQYTRDKKFIEINGEAMNQLFALRTSLDKYSWSAEGSERLSLLGVVLTQYQEK
RRAFLESSDRAALAFSQINTMDLASLAEKLASSQASVPAGIAAPLLSLSFKTEQAAFYIQ
AFIRKPESVALDKFTGIRDTIAPLVNQLKGDSDNALAEILAEVDQKTLSGSALLNNYLLS
VRAESLASEEMTAAAGKLNSAITGLAFFQSEMAQKYIHTAIWQIGLATLACIILSLIIAW
RMTRSITIPLRETLSSAKRIAEGDLTSEITSSRTDELGELMTAVGTMNQSLCNIISRVRD
GVNNVARASSEIAAGNTDLSSRTEQQSAAVVETAASMEELTSTVKQNAENAHHASQLATD
ASHNASRGGNIISDVISTMGGISQSSGKIGEIISVINGIAFQTNILALNAAVEAARAGEQ
GRGFAVVAGEVRNLAQRSSLAAKEIETLISESLSRVSNGTELVNRAGNTMEDIVRSVSQV
RDIMGEIAAASDEQNRGITQIAQAMTEMDTTTQQNAALVEESSAAASSLEEQALELERTV
AVFRVPSSGLLTPKVQAVTPVLKPQSSFRTSETNWETF
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaatattataaaaaaagttacggatttaaaaatagggggcaaactggcgctgggattc
acactggtcatcctggcctctgttatcatagcggcgctcgcgtttcgctgttttttaagt
attcaggaaaactcagccaagcgggatgttaccgttcagatgctggacacgctggcaaaa
gccaggcttaaccgcacgctttttcagtacacccgggataaaaagtttatcgagattaac
ggcgaggcgatgaatcagctgtttgctttacgaaccagtctcgataagtactcgtggtca
gccgaaggaagtgagaggctttctctcctgggcgtggttctgacgcagtatcaggaaaaa
cgtcgggcctttcttgagagcagtgacagggctgcactcgcgtttagtcagataaacacg
atggatctggcctcactggctgaaaaactggcttccagtcaggcttctgtccccgccggg
attgctgcgcccctgctttctctcagtttcaaaacagagcaggcagcgttttatatccag
gcctttatcagaaagccagagtctgtcgcgctggataaattcactgggatcagggacacg
attgctccgcttgttaaccagctcaaaggcgattctgacaatgcgctcgctgaaatactg
gcggaagtggaccagaaaactttatcgggttccgccctgttaaataattatctcctttcg
gtgcgggcagaaagcctggcttcagaggaaatgaccgcagcggcaggcaaactgaatagc
gccatcacaggactcgcgttctttcagtcagagatggctcagaagtatatccacaccgca
atctggcagattggtttggctaccctcgcctgtattattctcagcctgattattgcctgg
cgaatgacgcggagcatcaccatcccgctgagagaaacgctgtcgtctgcaaaacgtatt
gctgaaggtgatctgacgtcagaaataaccagctcccgcactgatgagcttggcgagctg
atgactgccgtgggcaccatgaaccagagcctgtgtaacatcatctcgcgggtcagggac
ggcgtgaataacgttgcccgcgcctcctctgaaattgcggccggtaacaccgatttgtcg
tcacgtaccgaacagcagtcggctgcagtggtcgagacggctgccagcatggaagaactg
acatccacggttaagcaaaatgcggagaacgcgcatcacgccagccagctggctaccgac
gcgtcacacaatgccagccgcggcgggaatatcatcagcgacgtgattagcaccatgggg
ggaataagtcagagttcaggcaagattggggaaatcatctccgttattaacggcatcgct
ttccagacgaacattcttgcgctaaacgccgcagtcgaggcggcccgggctggcgagcag
gggcgcggattcgctgtggttgccggtgaagtccgcaaccttgcgcagcgcagttcgctt
gctgcaaaagaaattgagacgctgataagtgagtctctaagccgggtaagtaacggtacc
gagctggttaaccgtgctggcaatacgatggaggatatcgtcaggtctgtatcgcaggtc
agggacatcatgggtgaaattgccgctgcgtcggacgaacagaaccgcgggatcacgcag
attgcgcaggccatgacggaaatggatacaactactcagcagaacgctgcgctggttgaa
gagtcatccgcagcggccagcagcctcgaagagcaggcgctcgagcttgagagaaccgtt
gccgtgttccgtgtgccttcttccggattgctgacgccgaaggttcaggcggtcacgcct
gtgttaaaacctcagtcgtccttcaggacatcagaaaccaactgggaaactttctga
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