Pantoea alfalfae: K6R05_19695
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Entry
K6R05_19695 CDS
T09440
Name
(GenBank) H-NS histone family protein
KO
K03746
DNA-binding protein H-NS
Organism
palf
Pantoea alfalfae
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
palf03036
]
K6R05_19695
03400 DNA repair and recombination proteins [BR:
palf03400
]
K6R05_19695
Chromosome and associated proteins [BR:
palf03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
K6R05_19695
DNA repair and recombination proteins [BR:
palf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K6R05_19695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF6604
DUF5327
Spc24
DUF3886
Motif
Other DBs
NCBI-ProteinID:
QZX97830
LinkDB
All DBs
Position
p2_CQ10:complement(34353..34754)
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AA seq
133 aa
AA seq
DB search
MNKNLSSLNNIRTLRAEARNMALDMLEELRQKLETVVNERRDEENARAAEAREKAEKLAF
YQELLLEEGINPAELVNSASPSATGTKKRAKRPAKYRYTDENGLVRYWTGQGRTPSVIKA
AIENGQSLDDFLL
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaacctgagcagcctgaataatatccgcacgcttcgtgcagaggcgcgcaat
atggctctggatatgctcgaagagttgcgccagaaattagagaccgtagtaaatgagcgt
cgtgatgaggaaaacgcgcgggcagcagaagcccgtgaaaaagcggagaaactggcgttt
taccaggagctgttgctggaagaaggcattaacccagcggagctggtaaatagcgcatcg
ccttccgcaaccggtacaaagaaacgcgcgaaacgtccggccaaataccgttacaccgat
gaaaatggcctggtccgttactggaccggtcagggtcgaacgccctccgtcattaaagcg
gcgattgaaaatggtcagtcgctggatgatttcctgctttaa
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