Parasphingopyxis algicola: HFP57_00555
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Entry
HFP57_00555 CDS
T06669
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
palg
Parasphingopyxis algicola
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
palg02000
]
HFP57_00555
Transporters [BR:
palg02000
]
Other transporters
Pores ion channels [TC:
1
]
HFP57_00555
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
Opacity
OmpA_membrane
Motif
Other DBs
NCBI-ProteinID:
QLC23665
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Position
98078..99271
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AA seq
397 aa
AA seq
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MRKFAIKAALATTALTVAATPALARDDTWYIGAEAGGTLISNADFDVTNSAGVFTNNAFS
VNTEPGFDVGGILGYDFGWFRLEADVSYRRAEVTGIEQNLGSRLPIAGTPRADGGVNYNP
GGPNGNPPGNPFQWNGAQGSVRILAFMANGLLDFGDDDGFQGYIGGGVGIARTSFDGIRV
TDAAPVYTDDSDSGFAWQLVAGVRYPLSRNFDIGVKYRFFNHDDVETTSFYSTSDETDVR
SHSALVTLTYNFGSAPPPPPPPPPPPPPPPPPPPPPPPPPPACEPGPFLVFFDWDQSDIR
PDAASVLDAVAAQYQTGRCPTSVMLAGHADRSGSATYNVGLSERRNASVRAYLASRGVPD
GAMSSEAFGESRPLVDTADGVREQQNRRVEITYGPGM
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagttcgccatcaaagcggcgctcgctacaaccgcgctcaccgtggcggctacg
ccggcgctggctcgcgatgatacatggtatatcggtgcagaagcaggtggtacgctgatc
agcaacgctgatttcgacgtcaccaattcggccggtgttttcaccaacaacgccttcagc
gttaatacggagcctggcttcgacgttggcggcatcctcggttacgatttcggttggttc
cgtctggaagccgacgtttcgtatcgccgtgccgaagtgaccggcatcgagcagaatctc
ggttcgcgtttgccgatcgcgggtacgccccgcgccgacggtggtgtgaactacaatccg
ggtggcccgaacggcaaccctccgggcaacccgttccagtggaatggcgctcagggtagc
gttcgcatcctcgccttcatggccaacggcctgttggacttcggcgacgatgacggtttc
cagggctatatcggtggtggtgtcggcattgcccgcaccagcttcgacggtatccgcgta
acggacgcggcgccggtttacaccgatgattcggattcgggcttcgcgtggcagcttgtc
gccggtgtgcgctatccgctttcccggaatttcgacattggcgtgaagtaccgcttcttc
aatcatgacgatgtggagacgacgagcttctacagcacgtcggacgaaacggatgtccgg
tcgcacagtgcgctggtgacgctgacctacaactttggttcggcaccgcctcctccgcct
ccgcctccgcctcctccgcctccgccgcctcctccgcctccgcctccgccgccgcctccg
ccggcgtgtgagcctggcccgttcctggtcttcttcgactgggatcagtcggacatccgt
ccggacgcggcatcggtgctcgatgcggttgctgcccagtatcagaccggtcgttgcccg
acctcggtcatgcttgctggtcacgctgaccgttcgggttcggctacctacaatgtgggt
ctgtccgagcgtcgtaacgcttcggtccgtgcgtaccttgcgtcgcgcggtgttccggac
ggtgcgatgtcgagcgaagcctttggtgagagccggccgctggtcgacaccgccgacggg
gttcgcgaacagcagaaccgtcgcgtcgagatcacttacggccccggcatgtaa
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