Parasphingopyxis algicola: HFP57_00745
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Entry
HFP57_00745 CDS
T06669
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
palg
Parasphingopyxis algicola
Pathway
palg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HFP57_00745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palg03400
]
HFP57_00745
Enzymes [BR:
palg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HFP57_00745
DNA repair and recombination proteins [BR:
palg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HFP57_00745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
bMG3
Adenylate_cycl
Knl1_RWD_C
DUF883
Motif
Other DBs
NCBI-ProteinID:
QLC23702
LinkDB
All DBs
Position
139794..140045
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AA seq
83 aa
AA seq
DB search
MTDESATDIAELSFEAALEELEAIVRKLEAGEAPLDESIELYARGDKLRAQCEARLKAAK
ARIDKLQLDADGKPAGVEPLDPA
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgaaagcgccaccgatatcgccgaactctccttcgaagctgcgctggaggag
ctggaggcgatcgtccgcaagctcgaggccggcgaagcgccgctcgatgaatcgatcgag
ctgtacgcgcgcggcgacaagctcagggcgcaatgcgaagcgcggctcaaggcggccaag
gcccggatcgacaagctccagctcgatgcggacggcaaaccggccggcgtcgaaccgctc
gatcccgcctag
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