Parasphingopyxis algicola: HFP57_01115
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Entry
HFP57_01115 CDS
T06669
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
palg
Parasphingopyxis algicola
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palg03400
]
HFP57_01115 (radA)
DNA repair and recombination proteins [BR:
palg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HFP57_01115 (radA)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DUF7125
DnaB_C
AAA_16
Lon_C
RecA_N
AAA_30
AAA_22
AAA
nSTAND_NTPase5
Rad51
nSTAND3
DAP3
NTPase_1
CbiA
Isochorismatase
AAA_29
AAA_5
AAA_24
NACHT
AAA_19
CobU
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
QLC23769
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Position
211173..212552
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AA seq
459 aa
AA seq
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MAKPQKRYVCQSCGSVASKWQGQCGDCKEWNTLVEDMGGVVTPFQAKHNLQSGGKAVDLV
GLDADIALPERIATGIAELDRALGGGLVEGSATLLGGDPGIGKSTLLLQACAIVAKAGHD
VTYISGEEAADQIRLRARRLGLGDAPMKLAAATSVRDILTTLGNGDGKPPALLVIDSIQT
MHSDLIEGAPGTVSQVRASAQELIRFAKERGTAVVLVGHVTKDGAIAGPRVLEHMVDTVL
SFEGERSHQYRILRAIKNRFGGTDEIGVFAMAEQGLEEVANPSSLFLTSRKDDVSGAVVF
PALEGTRPVLVEIQALVVRLASGATPRRAVVGWDSGRLAMILAVLEARCGLSFSTSEVYL
NVAGGYRIVDPAADLAVAAALISALSEQPIPAETVAFGEISLSGEVRTVSHAALRLREAS
KLGFAKALLPASIDSRESGMALQGFSALRGLVDHLLGRA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccccagaaacgatatgtctgccagtcctgcgggtcggtcgcatcgaaatgg
cagggccagtgcggcgactgcaaggaatggaacacgctcgtcgaggatatgggcggcgtc
gtgacgccgtttcaggccaagcataacctgcaatcgggcggcaaggcggtcgatctggtc
gggcttgacgccgatatcgccttgcccgagcggatcgcgaccggaatcgccgaactcgac
cgggcgctgggcggcgggcttgtcgagggatcggcgacgctgctcggcggcgatccgggg
atcggcaagtcgactctgctgctccaggcctgcgcgatcgtcgcaaaggcaggtcatgac
gtcacctatatctcgggcgaggaagccgccgaccagatcaggctgcgcgcccggcggctg
gggctcggcgatgcgccgatgaagctcgccgctgcgacgtccgttcgcgatatactgacg
acgctcggcaatggcgacggaaagccgccggcgctgctggtcatcgattcgatacagacg
atgcacagcgatttgatcgaaggggcgccgggcacggtgagccaggtgcgcgcctcggcg
caggaactgatccgcttcgccaaggaacgcgggacggcggtcgtcctggtcggccatgtc
accaaggacggcgcgatcgccgggccgcgcgtgctcgaacatatggtcgatacggtgctc
agcttcgagggcgagcgcagccatcagtatcggatattgcgggcgatcaagaaccggttc
ggcgggaccgacgagatcggcgtgttcgccatggccgagcaggggctggaagaggtcgcc
aacccgtcctcgctgttcctcacgagccgcaaggacgatgtcagcggcgcggtcgtcttt
cccgcgctggaagggacgcggccggtactcgtcgaaatccaggcgctcgtcgtgcggctg
gcgagcggggcgacgccgcgccgcgcggtcgtcggctgggattcgggacgactggcgatg
atcctcgccgtgctcgaagcgcgctgcggactcagcttctcgacctcggaagtttatctc
aacgtcgccggcggctatcgcatcgtcgatccggcggccgatctcgcggtggccgccgcg
ctgatctcggcgctgtcggaacagccgattccggccgagaccgtggcctttggcgagata
tcgctatcgggcgaggtgcgcaccgtgtcgcatgcggcattgcggctgcgcgaggcgtcc
aagctcggcttcgccaaggcattgctgcccgcctcgatcgatagccgcgagagcggaatg
gcgctgcagggcttctcggcattgcgcggactggttgaccatctgctgggccgcgcctag
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