Parasphingopyxis algicola: HFP57_01400
Help
Entry
HFP57_01400 CDS
T06669
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
palg
Parasphingopyxis algicola
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
palg03009
]
HFP57_01400 (rimO)
Enzymes [BR:
palg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HFP57_01400 (rimO)
Ribosome biogenesis [BR:
palg03009
]
Prokaryotic type
ribosomal protein modification factors
HFP57_01400 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
RNase_II_C_S1
DUF7030
Motif
Other DBs
NCBI-ProteinID:
QLC23819
LinkDB
All DBs
Position
complement(259575..260924)
Genome browser
AA seq
449 aa
AA seq
DB search
MAARLPSPPKVGMVSLGCPKALVDSERILTKLRSDGYGLSPDFDGADVVLVNTCGFLDSA
KEESLEAIGEAIAENGRVIVTGCMGNEADVIRERFPDVLAVSGPQQYEEVVGAVHEAAPM
PPSPYVDLVPETGLKLTPRHYSYVKISEGCNHRCAFCIIPSIRGDLASRRPDAVLREAEK
LVAAGTKELLIISQDTSAYGVDIRHAEWPWKDGQVRAHMTDLARELGKLGTPENEVWVRL
HYVYPYPHVDKVIPLMADGLITPYLDIPFQHASPKILKAMRRPANEAKVLERIAKWRTIC
PDLTIRSTFITGFPGETEEDFQYLLDWLDEAQLDRVGAFRYEPVEGARANALPDPVPEEV
KEERYARLMEKCATISAAKLQAKIGTVQKVIIDLVDKDGGATGRSQADAPEIDGEVHLRD
ATGLQPGDIVRVEIEDADAHDLFGVPVES
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcgtcttccctcaccgcccaaggtcggcatggtttcgctcggctgccccaag
gcgctggtcgacagcgagcgcatcctcaccaagctgcgctctgacggctatggcctgtcg
cccgatttcgacggcgcggacgtcgtgctcgtcaacacctgcggtttcctcgacagcgcg
aaggaagaaagcctcgaagcgatcggcgaggcgattgcggaaaacggccgggtgatcgtc
accggctgcatggggaacgaggccgatgtaatccgcgaacgtttcccggatgtcctcgcc
gtatcgggaccgcagcaatatgaggaggtcgtcggcgcggtgcacgaagcggcgcccatg
ccgccctcaccctatgtcgatctggtgcccgaaacaggcctcaagctgacgccgcgccat
tacagctatgtgaagatttcagagggctgcaaccatcgctgcgccttctgcatcattccc
tcgatccgcggcgatctcgccagccgccgcccggatgcggtgctgcgcgaagccgagaaa
ctggtcgcggcggggacgaaagaactgctgatcatcagccaggacacatcggcctatggc
gtcgatatccgccacgccgaatggccgtggaaggacggccaggtccgcgcccatatgacc
gatctggcgcgcgaactgggcaagctggggacacccgagaacgaggtctgggtgcggctc
cattacgtctacccctatccgcatgtcgacaaggtcatcccgctgatggcggacgggctg
atcacgccctatctcgacatccccttccagcatgcgtcgccgaaaatcctcaaggccatg
cgccgccccgcgaacgaggccaaggtgctcgagcggatcgccaagtggcggacgatctgc
cccgatctgacgatccgctcgaccttcatcaccggctttcccggcgaaaccgaggaggat
ttccagtatctgctcgactggctcgacgaagcgcagctcgaccgggtcggcgccttccgg
tacgagcccgtcgaaggcgcgcgcgccaacgcgttgcccgatccggtgcccgaagaggta
aaggaagaacgctacgcccggctgatggaaaagtgcgcgacgatctcggcggccaagctg
caggcgaagatcggcacggtgcagaaggtcatcatcgacctggtcgacaaggatggcggc
gcgaccggccggtcacaggccgatgcgccggagatcgacggcgaagtccatctgcgcgat
gcgaccggtttgcagccgggcgatatcgtccgggtcgagattgaagacgccgacgcgcac
gacctgttcggcgttccggtcgaatcctag
DBGET
integrated database retrieval system
