Parasphingopyxis algicola: HFP57_02730
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Entry
HFP57_02730 CDS
T06669
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
palg
Parasphingopyxis algicola
Pathway
palg03420
Nucleotide excision repair
palg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HFP57_02730
03430 Mismatch repair
HFP57_02730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palg03400
]
HFP57_02730
Enzymes [BR:
palg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HFP57_02730
DNA repair and recombination proteins [BR:
palg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HFP57_02730
MMR (mismatch excision repair)
Other MMR factors
HFP57_02730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_22
DUF3553
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
QLC24054
LinkDB
All DBs
Position
complement(552742..555015)
Genome browser
AA seq
757 aa
AA seq
DB search
MTEPAVQQPEPPYLRALNAPQREAVLTTEGPLLVLAGAGTGKTACLTARLAHLIWTRKAW
PSEILAVTFTNKAAREMKERVARALDQDVEGMPWLGTFHAIGAKMLRRHAELAGLESNYT
ILDTDDQLRLLKQLIQAAEIDEKRWPARLLGGLIDRWKNRGWVPADVTADESEAYANGKG
QQLYQAYQDRLKTLNACDFGDLLLHMLVILKAHRDVLEMYQQRFKYILVDEYQDTNSSQY
LWLRLLAQERKNICVVGDDDQSIYSWRGAEVANILRFEKDFPGAQIVRLEQNYRSTQHIL
SAAAGVIGHNGGRLGKTLWTDEGDGEKVKVIGVWDGPEEARRVGEEIEAHQAKGGSLDDV
AILVRAQFQTREFEDRFIQIGMPYKIVGGFRFYERQEIRDALAYLRVIVQPADDLAFERI
VNTPKRGLGDKAVGMIHGYSRRENIPLSLAAARIIDTDELTPRARKPLGELMGNFARWRD
MANDLPHPELARLVLDESGYTAMWQNDRSADAAGRLENLTELTRAMEEFDTLGSFLEHVS
LVMDNDADRESEKVTIMTIHAAKGLEFDTIFLAGWEEGVFPSQRSLDEGGAKSLEEERRL
AYVAITRARRLCHIVHAANRRIYGQWTSSIPSRFIGELPDEHIEAETSMTGGESLWRANW
SEQSDPFSNVARAGKRGPGWQRAAAAGSLPKAIKVMEAKASAASFAAKPRSDIAIGQRVF
HQKFGYGAVEEIEGNKLEIEFEKAGRKRVLDSFVELA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaacccgccgttcaacagcccgaaccgccctatctgcgcgcgctcaacgcgccg
cagcgcgaggcggtgctgacgaccgaaggccccttgctggtgctcgcgggcgccggcacg
ggcaagaccgcctgcctcactgcccggctcgcccatctgatctggacgcgcaaggcctgg
ccgtccgaaattctcgccgtcaccttcaccaacaaggccgcgcgggagatgaaggagcgc
gtcgcccgggcgctcgatcaggatgtcgaaggcatgccctggctcggcaccttccacgcg
atcggcgcgaagatgctgcgccgccatgccgagctggccgggctggaaagcaattacacg
atcctcgataccgacgatcagctacggctgctgaaacagctgatccaggccgcggagatc
gacgagaaacgctggccggcgcggctgctcggcgggttgatcgaccgctggaagaatcgc
ggctgggtgcccgccgatgtgacggccgacgaaagcgaggcctatgccaacggcaagggc
cagcaactctaccaggcctatcaggaccggctgaaaacgctcaacgcctgcgatttcggc
gatctgctgctgcacatgctcgttatcctcaaagcgcatcgcgacgtgctggaaatgtac
cagcagcggttcaaatatattctcgtcgacgagtatcaggacaccaacagttcccaatat
ctgtggctccgcctgctcgcgcaggagcgcaagaatatctgcgtcgtcggtgacgacgac
cagtcgatctacagctggcgcggggcggaagtcgccaatatcctgcgtttcgagaaggat
tttcccggcgcgcagatcgtccggctcgagcagaattaccgctcgacccagcatatcctc
tcggccgccgccggggtgatcggccataatggcgggcggctcggcaagacgctgtggacc
gacgagggcgatggcgagaaggtcaaggtgatcggcgtatgggacgggcccgaagaggcc
cgccgcgtcggcgaggagatcgaggcgcatcaggcgaagggcggcagtctcgacgatgtc
gcgattctcgtccgcgcccagttccagacgcgcgaattcgaagaccgcttcatccagatc
ggcatgccgtacaagatcgtcggcggtttccgtttctacgaacggcaggaaatccgcgac
gccctcgcctatctgcgcgtgatcgtccagcccgccgacgacctcgccttcgaacggatc
gtcaacacgcccaagcgcgggctgggcgacaaggcggtggggatgatccacggctattcg
cggcgtgagaatatcccgctcagtctcgccgcggcgcggattatcgataccgacgagctg
acgccgcgcgcgcgcaagccgctcggcgagctgatgggcaattttgcgcgctggcgcgac
atggcgaacgacctgccgcatcccgaactcgcccggctcgtgctcgatgaatcgggctat
accgcgatgtggcagaacgaccgttcggccgacgccgcgggccggctagagaatctgacc
gaactgacccgcgcgatggaggagttcgacacgctcggttccttcctcgagcatgtcagc
ctcgtcatggacaatgatgccgatcgcgagtccgagaaagtgacgatcatgacgatccac
gccgccaaggggctggaattcgacacgatctttctcgccggatgggaggaaggcgtcttc
ccgtcccagcgctcgctcgacgaaggcggcgccaagagcctcgaggaggagcgccgtctc
gcctatgtcgcgatcacccgcgcccggcggttgtgccatatcgtccatgcggccaaccgg
cggatttacgggcaatggacgagttcgattccgtcccgctttatcggcgaactgcccgac
gagcatatcgaggccgaaaccagcatgaccggcggggaatcgctctggcgcgccaactgg
tccgaacagtccgatcccttctccaacgtcgcccgcgccggcaagcgcggcccgggctgg
caacgcgccgcggccgcaggatcgctacccaaggccatcaaggtcatggaagccaaggcc
agcgcagccagcttcgccgcgaaaccgcgctccgacatcgccatcggccagcgcgtcttc
caccagaagttcggctatggcgcggtcgaggagatcgagggcaacaagctcgagatcgag
ttcgaaaaggctgggcggaagcgggtgctcgacagcttcgtggagctggcctga
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