Parasphingopyxis algicola: HFP57_03380
Help
Entry
HFP57_03380 CDS
T06669
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
palg
Parasphingopyxis algicola
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
palg01011
]
HFP57_03380
Enzymes [BR:
palg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HFP57_03380
Peptidoglycan biosynthesis and degradation proteins [BR:
palg01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HFP57_03380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
QLC24162
LinkDB
All DBs
Position
682850..683842
Genome browser
AA seq
330 aa
AA seq
DB search
MQLFDKKRWTVLPALAALAACSSGGRELPPASAGADGSVYGAAVSDTPVQIGPPYTINRR
TYTPADPSHYDEVGLASYYGAELSGRPTANGERFRPSGISAAHRTLPLPSYVEVTALQTG
RTILVRVNDRGPFAGDRIIDLSVGAARQLGIVERGTAPVRVRRVQPVESDRARLRAGQPA
QPRLQTSPQLLEALRAQFERGGGIIPQATPSPDAPASTGQAATSGGNAGPSNAGVNWQIE
EEPQSRPVQSAPPAAAGDYYVQLGAFSNAANAQRLANRAQRLGTVRIVSAGSIRRVRLGP
YPTQAAARQALSQVRSAGFGDARIFRDPAQ
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgttcgataagaagcgatggacggtcctgccggcgctcgccgcactcgccgca
tgcagcagcggcggccgcgaactgccgccggcttcggcgggtgcagacggctccgtttac
ggcgccgccgtatcggacacaccggtccagatcggtccgccctacacgatcaaccgccgc
acctatacgcccgccgatccctcgcattatgacgaggtggggcttgcctcctattatggc
gccgagctttcgggccggccgacagccaacggcgaacgattccgtccctcggggatcagc
gccgcgcaccggaccctgccgctgccgtcctatgtcgaggtaacggcgctgcagaccggc
cgcacaatcctcgtccgggtcaacgatcgcgggccgttcgccggggatcggatcatcgat
ctttcggtcggcgccgcgcggcagctcggcatagtggagcgggggacggcaccggtccgc
gtccgacgcgtccagcctgtcgaaagcgatcgcgcgcggctgcgcgcgggccaacccgcc
caaccgcgcctgcagacctcgccgcagctgctcgaagccctgcgcgcgcagttcgagcgc
ggcggcggaatcattccgcaagcaacaccatcgcccgacgcaccggcctcgacgggccag
gcggcaacttcgggcggcaacgcgggcccgtccaatgcaggtgtgaactggcagatagag
gaggaaccgcaatcccggcccgtgcagtccgccccaccggccgcagccggcgactattac
gttcagctcggcgcgttctccaacgccgccaatgcgcaaaggctcgccaaccgggcgcaa
cgcctcggcacggtgcgcatcgtttcggcgggttccatccgccgcgtcaggctcggaccc
tatccgacccaggcggccgcgcgccaggcattgtcacaggtgcggtcggccggatttggc
gacgcccgaattttccgcgatcccgcccagtag
DBGET
integrated database retrieval system
