Parasphingopyxis algicola: HFP57_04080
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Entry
HFP57_04080 CDS
T06669
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
palg
Parasphingopyxis algicola
Pathway
palg02024
Quorum sensing
palg03060
Protein export
palg03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HFP57_04080 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HFP57_04080 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HFP57_04080 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
palg02044
]
HFP57_04080 (ffh)
Enzymes [BR:
palg01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HFP57_04080 (ffh)
Secretion system [BR:
palg02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HFP57_04080 (ffh)
Eukaryotic Sec-SRP protein
HFP57_04080 (ffh)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_16
AAA_33
AAA_22
TctA
ABC_tran
nSTAND_NTPase5
ResIII
Thymidylate_kin
AAA_19
AAA_31
AAA_17
AAA_24
AAA_14
APS_kinase
VirC1
nSTAND3
CPSase_L_D1
NB-ARC
DnaB_C
NPHP3_N
YqeC
AAA_5
NACHT
DO-GTPase1
ATPase_2
AAA
6PF2K
KTI12
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QLC24287
LinkDB
All DBs
Position
complement(829145..830596)
Genome browser
AA seq
483 aa
AA seq
DB search
MFDSLSDRLGGVFDRLKGRGALSENDVRAAMREVRIALLEADVALPVAREFVDGVTEQAV
GQQVLKSVTPGQQVVKIVNDALVEMLGAEASELNVEGTPPNVVMMVGLQGSGKTTTTAKI
AKRLTEKGRKKVLMASLDVNRPAAQEQLAVLGQQTDVATLPIVDGQQPVDIAKRALQAAK
LQGFDVVMLDTAGRLHVDQQLMDEMKAVADVSEPEEILLVVDALTGQDAVNVAQNFSEQV
PLTGTVLTRMDGDARGGAALSMRAVTGTPIKFVGVGEKLDEIEEFHPERVAGRILGMGDV
VSLVERAAETVEKDEAEAFAKKMAKGQFDLNDLRTQLAQMQRMGGLGALAGMLPGMKKAQ
AAMAASNMDDKVLVHMDAMIGSMTVEERAKPGLLNAKRKRRVAMGSGTTVQEVNKLLKMH
KEMATAMKRIKKMGGIKGLMKMFGGGPDGLPTDPGDMPPGGMPGLPGMPGQGIPPGLDKL
LKR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacagtctcagcgatcggctcggcggcgtattcgaccgtttgaaaggccgcggt
gcgctcagcgaaaacgatgtccgggcggcgatgcgcgaagtgcgtatcgcgttgctcgag
gccgatgtcgcgctgccggttgcgcgtgagttcgtcgacggggtgacggaacaggcggtc
ggccagcaggtgctgaaatccgtcacgccgggccagcaggtcgtcaagatcgttaacgac
gcgcttgtcgagatgctgggagccgaggcatccgagctcaatgtcgaggggactccgccc
aatgtcgtgatgatggtcggcctgcagggttcgggcaaaaccaccaccaccgccaagatc
gccaagcggctgacagaaaagggccgtaaaaaggtgctgatggcgtcactggacgttaat
cgtccggcggcgcaggaacagctggcggtgctcggccaacagaccgacgtcgcgacgctt
cccattgtcgatgggcagcagcctgtcgatatcgccaagcgcgcgcttcaggcagcgaaa
ctgcagggtttcgatgtcgtgatgctcgataccgccggccgtctccatgtcgaccagcag
ctgatggacgagatgaaggcggtcgcggacgtttccgagccggaggaaatcctgctcgtc
gtcgatgcattgactggccaggacgcggtcaacgtcgcgcagaacttctccgaacaggtg
ccgctgacgggtaccgtgctcacccggatggacggtgatgcgcgcggcggcgcggcgctg
tcgatgcgcgcggttacgggcacgccgatcaagttcgtcggcgtcggcgagaagctggac
gagatcgaggaattccatcccgagcgcgttgccggccgcatcctcggcatgggcgatgtc
gtcagcctggtcgaacgcgcggcggagacggtcgagaaggacgaagccgaagccttcgcc
aagaagatggccaagggccagttcgacctgaacgatttgcgcacgcaactggcgcagatg
cagcgcatgggcgggctcggcgcgctggccggcatgctgccgggcatgaaaaaggcgcag
gctgcgatggccgccagcaatatggacgacaaggtgctcgttcacatggacgcgatgatc
ggttcgatgaccgtggaggagcgggcgaagccgggccttctcaacgccaagcgcaagcgg
cgcgtggcgatgggctcgggcacgaccgtgcaggaggtcaacaagctcctcaagatgcac
aaggaaatggcgaccgcgatgaagcgcatcaagaagatgggcggcatcaaggggctgatg
aagatgttcgggggcggtccggacggcctgccgaccgatcccggagacatgccgcccggc
ggtatgccgggtctccccggaatgccggggcagggtatccctccggggctcgataaatta
ctgaaacgctag
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