Parasphingopyxis algicola: HFP57_04245
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Entry
HFP57_04245 CDS
T06669
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
palg
Parasphingopyxis algicola
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palg03021
]
HFP57_04245 (rpoH)
Transcription machinery [BR:
palg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HFP57_04245 (rpoH)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
RimM
ARA70
Motif
Other DBs
NCBI-ProteinID:
QLC24315
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Position
853437..854333
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AA seq
298 aa
AA seq
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MAKAVATIPAIGGEIGLNRYMTEIKKFPILSQEEEYMLAKRFEEHDDREAAQKLVTSHLR
LVAKIAMGYRGYGLPVAELISEGNIGLMQGVKKFEADRGFRLATYAMWWIRASIQEYILR
SWSLVKMGTTAAQKKLFFNLRKMKARLNAFEDGDLKPEDVEKIASDLGVTEDEVTSMNRR
MAMGGDTSLNVPMREDGEGQWQDWLVDDEPLHDQTIANEQEADVRREMLMEAMGELNERE
QHILTERKLTDDPQTLEELSQVYGVSRERIRQIEVRAFEKIQKAMMRIAEEKKLLPAS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagccgttgcgacaattccggcgatcgggggcgaaatcggcctcaatcgttac
atgacagaaatcaagaaattcccgatcctgtcccaggaagaggaatatatgcttgccaag
cgcttcgaggagcatgacgaccgcgaagccgcccagaagctcgtgacgtcgcatctgcgt
ctcgtcgcgaagattgccatgggctatcgcggctatggcctgcccgttgccgagctgatc
tcggagggcaatatcggcctgatgcagggcgtgaagaaattcgaagccgatcgcggcttc
cgcctcgccacctatgcgatgtggtggatccgcgcgtcgattcaggaatatattctgcgc
tcgtggagcctcgtgaagatgggcaccaccgccgcgcagaagaagctgttcttcaacctg
cgcaagatgaaggcgcggctcaacgcgttcgaggacggcgacctgaagcccgaagatgtc
gagaagatcgccagcgatctcggtgtgaccgaggacgaggtgacttcgatgaaccgccgc
atggcgatgggcggcgatacgtcgctcaacgtgccgatgcgcgaggacggcgaaggccag
tggcaggactggctcgtcgacgacgagccgctgcacgatcagacgatcgccaacgagcag
gaagccgatgtccgccgcgaaatgctgatggaagcgatgggcgaactcaacgagcgcgaa
cagcacatcctcaccgagcgcaagctgaccgacgatccgcaaacgctcgaggagttgagc
caggtctatggcgtgtcgcgcgagcgcatccgccagatcgaggtccgcgccttcgaaaag
atccagaaagcgatgatgcggatcgccgaagaaaagaagctgctgccggcgagctag
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