Parasphingopyxis algicola: HFP57_04560 Help Entry HFP57_04560       CDS       T06669                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism palg  Parasphingopyxis algicola Pathway palg03018   RNA degradation Brite KEGG Orthology (KO) [BR:palg00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     HFP57_04560  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:palg03019]     HFP57_04560 Messenger RNA biogenesis [BR:palg03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      HFP57_04560 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP Lactamase_B Lactamase_B_2 RNase_J_C RMMBL Anti-Pycsar_Apyc1 Motif Other DBs NCBI-ProteinID:  QLC24371 LinkDB All DBs Position complement(923221..924858) Genome browser AA seq 545 aa AA seqDB search MTPKNELLFLALGGSGEIGMNVNLYGTQGKWVMVDCGMTFGDPYYPGIELVLPDLEFIED RVDDLLGIVLTHGHEDHIGALPYLAGDLGVPLYATPFTAGLITKKLEEAGLTEEIELNVI DNGDSFDLGPFGFRYIPLAHSILEGNALVIETEYGRVFHTGDWKLDEDPQTGTPTPAADL TAIGDEGVLALVCDSTNVFNEKASGSEGAVKEGLAKVIGEATGRVLVTTFASNAARLQTL GRIAKETGRKVCVAGRSLDRIIDTAQAVGYLKDFPPTVDFDEAMRVPPRELLIIATGGQG ESRAALSRIAEDNHPLTLDSGDLVIFSSKQIPGNELAIGRVQNALAARQIPMITDRQAHV HVSGHPGRPELTDMYGWIRPEILVPVHGELRHMAEQARFGAAQGIPKTIVQQNGDVVRLA PDGPSVIGHERVGRLVLDGDTIIAADGEAMNERRRIAQRGIIAVTVALNGSDKLVGKPSF SMAGIPIEDEREEFIDDAVGAAADAARKGAKDPEKLREAIRLAVRRTATHWTGKKPVVNV SLMEV NT seq 1638 nt NT seq  +upstreamnt  +downstreamnt atgactcccaaaaacgaactgctttttctcgcgctcggcgggtcgggcgagatcggcatg aacgtcaatctctacggcacccagggcaaatgggtgatggtcgattgcggcatgaccttc ggcgatccctattatccggggatagaactcgtgcttcccgatctcgaattcatcgaggat cgcgtcgacgacctgctcggcatcgtcctgacccatggccatgaggaccatatcggcgcg ctgccctatcttgcgggcgatctgggcgtcccgctctatgcgacgcccttcaccgccggg ctgatcaccaagaagctcgaggaagcggggctgacggaggaaatcgaactcaacgtcatc gataatggcgacagtttcgatctcggtcccttcggctttcgctatataccgctcgcgcat tcgattctcgagggcaatgcgctcgtcatcgaaaccgagtatggccgcgtcttccatacc ggcgactggaaactggacgaagatccccagaccggaacgccgacaccggccgcggacctg accgcaatcggcgatgagggcgtgctcgcgctggtctgcgattccaccaatgtgttcaac gaaaaagcctcgggcagcgagggcgcggtgaaagaagggttggccaaggtcatcggcgaa gcgaccggtcgcgtgctcgttacgacgttcgcctccaatgccgcccggctccagaccctc ggccggattgcgaaggaaaccggacgcaaggtctgcgtcgcagggcgttcgctcgaccgg atcatcgatacggcccaagcggtcggctatctgaaagatttcccgcccacggtcgatttc gacgaggcgatgcgcgtcccgccgcgcgaattgctgattatcgcgacgggcgggcagggc gaatcccgcgccgcgctctcgcgaatcgccgaagacaatcatccgctcaccctcgacagt ggcgatctcgtcatattcagctcgaagcagattccgggcaacgagctggcgatcggtcgc gtccagaatgcgctcgcggcgcgccagatcccgatgatcaccgaccggcaggcccatgtg catgtctcgggtcatccgggccgaccggagttgaccgacatgtatggctggattcggcct gaaatcctcgtccccgtgcacggcgagctgcggcatatggccgagcaggcccggttcggc gcggcgcagggcattcccaaaacgatcgtccagcaaaatggcgatgtcgtccgcctcgcg cccgatggtccgtccgtgatcggccatgagcgtgtagggcggctcgtgctcgatggcgac acgatcattgcggccgatggcgaggcgatgaatgaacgccgccgcatcgcgcagcgcggc atcatcgcggtgaccgtcgcgttgaacgggagtgacaaactcgtcggcaagccgtccttt tcgatggccggcatcccgatcgaagacgaacgggaagagtttatcgacgatgcggttggg gccgccgccgatgctgcgcgcaagggtgcgaaggaccctgaaaagttgcgcgaggcgatc cgtctggccgttcgccggacagcaacccattggacgggcaagaaacccgtggtcaatgtg tcgctgatggaggtgtaa

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