Parasphingopyxis algicola: HFP57_05815
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Entry
HFP57_05815 CDS
T06669
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
palg
Parasphingopyxis algicola
Pathway
palg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HFP57_05815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palg03400
]
HFP57_05815
Enzymes [BR:
palg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HFP57_05815
DNA repair and recombination proteins [BR:
palg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HFP57_05815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
QLC24590
LinkDB
All DBs
Position
1165453..1167618
Genome browser
AA seq
721 aa
AA seq
DB search
MTRVRVLILNAALGPLDYRVPGGMAAPPGSIVKVPLGPRQVTGVVWDDGRLEGAPVAAEK
LRPILGVYDAPPIPETLRRLIEWTADYYLAPLASVLRMSLASTSGYSGEKTITEYRASGG
MPERMTPKREQALELIGDSQGIIRELSEIGEVSVGVIRGLVKAGALEPVEVSLDAPFPLP
DPDFGPPELEEGQQQASARLVEAVEARAFAPIMLDGVTGSGKTEVYFEAIAEALRMGRQT
LVLLPEIALTEPFLTRFTARFGCEPVAWHSGLRQSERRRAWRAIATGEAKVTVGARSSLF
LPYPKLGLIIVDEAHESAFKQEEGVMYHARDVAVMRGHFESFPIVLASATPAIETKQMVE
IGRYESVTLPGRYGAAELPELAAIDMLQDPPPRGSWLAPTLVRAVEETLARKEQSLLFLN
RRGYAPLTLCRTCGHRFQCPNCTAWMVEHRLLARLACHHCGHVMPPPDECPECGAEDSLV
ACGPGVERIADEVAALFPEAKTAIVTSDTLWSPAKAAEFVHRMEAGDIDIVIGTQLVTKG
YHFPNLTLVGVVDADLGLQGGDLRAAERTFQQIMQVSGRAGRGDKPGRVFIQTHEPTAPV
IEALVSGDAESFYETETEARRFAGAPPFGRYAGIVISSEDEKEAFETARVIGQTAPKVEG
MMVLGPAPAPLAMLRGRHRQRLLVHARRALDVQSVIRDWLGERDWPKGVRVTVDVDPYSF
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgcgtccgcgtcctgatcctcaacgccgcgctcggcccgctcgactatcgggtg
ccgggcggcatggccgcgccgccgggcagcatcgtcaaagtgccgctcgggccgcgccag
gtgacgggcgtggtctgggacgatgggcggctggagggcgcgccggtcgcggcggagaag
ctgcggccgatcctcggcgtctatgacgcaccgccgattcccgaaacgctgcgccggctg
atcgaatggacggccgactattatcttgcgcccctcgcctccgtgctccgcatgagcctt
gcgtccaccagcggctattcgggcgagaagacgatcaccgaataccgcgcctcgggcgga
atgcccgagcggatgacgccgaagcgcgaacaggcgctcgagctgatcggcgacagccaa
ggcatcatccgcgagctttccgagatcggcgaggtgtcggtcggcgtgattcgggggctg
gtgaaggcgggcgcgctcgaaccggtcgaggtctcgctcgacgcgcccttcccgctcccc
gatcccgatttcggcccgcccgagctcgaggagggccagcaacaggccagcgcgcggctc
gtcgaagcggtcgaggcgcgcgcgttcgcgccgatcatgctcgacggcgtcacgggatcg
ggcaagaccgaggtctatttcgaagccatcgccgaagccttgcgcatggggcggcagacg
ctcgtgctgctccccgagatcgcgctgaccgagccgttcctgacccgctttaccgcgcgc
ttcggctgcgagcccgtcgcctggcattcggggctgcgccagtccgaacgccgccgggcc
tggcgcgccatcgcgaccggcgaggcgaaggtgacggtcggcgcgcgctcctcgctcttt
ctcccctatcccaagctcgggctgatcatcgtcgacgaagcgcatgaaagcgccttcaag
caggaggaaggcgtcatgtaccatgcccgcgacgtcgcggtgatgcgtgggcatttcgag
agcttcccgatcgtcctcgcctcggcgacgccggcgatcgagaccaagcagatggtcgag
atcggccgctatgaaagcgtcaccctgcccggccgctacggggcggcggaactgcccgag
cttgccgcgatcgacatgctgcaggacccgccgccgcgcggctcctggctcgcgccgacg
ctcgtccgcgcggtcgaggagacgctggcccgcaaggaacagtcgctgctttttctgaat
cgccgcggctatgcgccgctcacattgtgccgcacctgcggccatcgcttccaatgcccg
aactgcacggcctggatggtcgagcaccggctgcttgcccgcctcgcctgccatcattgc
ggccatgtcatgccgccgcccgacgaatgcccggaatgcggcgcagaggacagcctcgtt
gcctgcggcccgggcgtcgagcggatcgccgacgaggtcgccgcgctgtttcccgaggcg
aagaccgcgatcgtcacctccgacacgctctggtcgccggccaaggccgccgagttcgtc
caccggatggaggccggcgatatcgatatcgtcatcggcacgcagctggtgacgaaaggc
tatcattttccgaacctgactctggtcggcgtcgtcgatgccgatctcgggttgcagggc
ggcgacctgcgcgcggccgaacgcacctttcagcagatcatgcaggtttcggggcgcgcc
gggcgcggcgacaagccgggccgcgtcttcatccagacccacgagccgaccgcgccggtc
atcgaggcgctggtgtcgggcgacgcggagagcttctacgaaaccgagaccgaggcccgg
cgcttcgccggagcgccgcccttcggccgctatgccgggatcgtcatctcctcggaggac
gagaaggaagcgttcgagactgcgcgggtcatcggccagaccgcgcccaaggtcgagggc
atgatggtcctcggccccgcccccgccccgctcgccatgctgcgcggccgccaccgccag
cgcctcctcgtccatgcccgccgcgcgctcgacgtgcagagcgtgatccgcgactggctg
ggcgagcgggactggccgaaaggcgtgcgtgttaccgtggatgtcgatccgtattccttc
ctctag
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