Parasphingopyxis algicola: HFP57_06230
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Entry
HFP57_06230 CDS
T06669
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
palg
Parasphingopyxis algicola
Pathway
palg03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HFP57_06230 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
palg03011
]
HFP57_06230 (rpsA)
Ribosome [BR:
palg03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HFP57_06230 (rpsA)
Bacteria
HFP57_06230 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
SH3_16
CsrA
Motif
Other DBs
NCBI-ProteinID:
QLC24668
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Position
1247334..1249046
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AA seq
570 aa
AA seq
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MATAPNPTRDDFEKLLNETLGDSDGFEGRVVKGTVTGIENDLAVIDVGLKSEGRVPLREF
ASPGQKADLSVGDEVEVFVDRVENSQGEAMLSRDRARREAAWDRLEAEYDKESRVEGTIF
GRVKGGFTVDLGGAVAFLPGSQVDIRPVRDVTPLMDIPQPFQILKMDRRRGNIVVSRRAV
LEETRAEQRSDLIQSLTEGQVIEGVVKNITDYGAFVDLGGIDGLLHVTDMSYKRINHPSE
MVNIGDKVTVQIVRINRETQRISLGMKQLETDPWEGASAKYPVDARFTGRVTNITEYGAF
VELESGIEGLVHVSEMSWTKKNVHPGKIVSTSEQVEVVVLEVDEEKRRISLGLKQAQDNP
WDSFAERFPVGAEVEGEVKNATEFGLFVGLDGDVDGMVHMSDISWGVSGEEALELHHKGE
TVKAVVLDVDPEKERISLGMKQLERGGASTDNGDLRKGKISTVTVLDVRDGGLDVQVGDD
GPTGFVKRADLGRDRDEQRPDRFQVGQKFDAMVVGFDRSKKPNFSIKALQVAEEKQAVKQ
YGSTDSGASLGDILGEALKQKGGDEDAKDS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcgccgaatcccacacgggacgattttgaaaaactgctcaatgaaaccctg
ggcgactccgacggcttcgaaggccgcgtcgtcaaaggtaccgttaccggtatcgagaac
gacctcgccgtcatcgatgtcgggctgaaatccgaaggccgcgtgccgcttcgcgaattc
gcgagcccgggccagaaagccgatctctcggtcggcgacgaagtcgaagtctttgtcgac
cgcgtcgaaaattcgcagggcgaagcgatgctcagccgcgatcgcgcccgccgcgaagcc
gcctgggaccggctcgaagccgaatatgacaaggaaagccgcgtcgagggcacgatcttc
ggccgcgtcaagggcggcttcaccgtcgatcttggcggcgccgtcgccttccttcccggc
agccaggtcgatatccgccccgtgcgcgacgtcaccccgctgatggacattccgcagccc
ttccagatcctcaagatggatcgccgccgcggcaacatcgtcgtgtcgcgccgcgccgtg
ctcgaggaaacgcgcgccgaacagcgttcggatctgattcagtcgctgaccgaaggccag
gttatcgagggtgtcgtcaagaacatcaccgattacggcgcgttcgtcgatctcggcggc
atcgacggtctgctccatgtcaccgacatgagctacaagcggatcaatcacccgtccgaa
atggtcaatatcggcgacaaggtcaccgtgcagatcgtccgcatcaaccgcgagactcag
cgcatcagcctcggcatgaagcagctcgagaccgacccctgggaaggtgcatcggccaaa
tatccggtcgacgcccgcttcaccggccgcgtcacgaacatcaccgaatatggtgcgttc
gtcgaactggaatcgggcatcgaaggcttggtccatgtctccgagatgagctggaccaag
aagaacgtccatccgggcaagatcgtctcgaccagcgaacaggtcgaagtcgtcgtactc
gaggtcgacgaagagaagcgccggatcagcctcggcctcaaacaggcccaggacaatccg
tgggacagcttcgccgaacgcttcccggtcggcgccgaagtcgaaggcgaagtcaagaac
gccaccgaattcggcctgttcgtcgggctcgacggcgatgtcgacggcatggtccacatg
tcggacatcagctggggcgtttcgggcgaagaagcgcttgagcttcaccacaagggcgaa
acggtcaaggccgtggtcctcgacgtcgatcccgagaaggaacgcatcagcctcggcatg
aagcagctcgaacgcggcggtgcctccaccgacaatggagatctgcgcaagggcaagata
tccacggtaaccgtgctcgacgttcgcgatggcggcctcgacgtgcaggtcggcgacgac
ggcccgacgggcttcgtcaagcgggccgatctcggccgcgaccgcgacgagcagcgcccg
gaccgtttccaggtcggccagaagttcgacgcgatggtcgtcggtttcgaccgctcgaag
aagccgaacttctcgatcaaggcgcttcaggtcgccgaggagaagcaggccgtcaaacaa
tatggctcgaccgattccggcgcgagccttggcgatattctcggcgaagcgctcaagcag
aagggcggcgacgaggacgccaaagacagctga
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