Parasphingopyxis algicola: HFP57_06235
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Entry
HFP57_06235 CDS
T06669
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
palg
Parasphingopyxis algicola
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palg03032
]
HFP57_06235
03036 Chromosome and associated proteins [BR:
palg03036
]
HFP57_06235
03400 DNA repair and recombination proteins [BR:
palg03400
]
HFP57_06235
DNA replication proteins [BR:
palg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HFP57_06235
Chromosome and associated proteins [BR:
palg03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
HFP57_06235
DNA repair and recombination proteins [BR:
palg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
HFP57_06235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QLC26830
LinkDB
All DBs
Position
1249348..1249626
Genome browser
AA seq
92 aa
AA seq
DB search
MIRSELVQKIAADNPELSTKDVERLVNCFFDSITEQLAKGGRVELRGFGAFSTRERKARV
GRNPRTGESVNVPAKRVPYFKPGKEMRERLNV
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatccgatccgaactcgttcagaagatcgcggctgacaatccggaactgtcgaccaag
gatgtcgaacgtctggtcaattgcttcttcgattccattaccgaacaactggcgaagggc
gggcgggtcgagctgcgcggcttcggcgctttctcgacacgtgaacgcaaggcgcgcgtg
ggccgcaacccgcgcacgggagaatccgtcaacgtaccggccaaacgcgtgccttatttc
aagcccggcaaggaaatgcgcgaacgcctcaacgtctga
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integrated database retrieval system
