Parasphingopyxis algicola: HFP57_07225
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Entry
HFP57_07225 CDS
T06669
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
palg
Parasphingopyxis algicola
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palg03019
]
HFP57_07225 (rnc)
03009 Ribosome biogenesis [BR:
palg03009
]
HFP57_07225 (rnc)
03036 Chromosome and associated proteins [BR:
palg03036
]
HFP57_07225 (rnc)
Enzymes [BR:
palg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HFP57_07225 (rnc)
Messenger RNA biogenesis [BR:
palg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HFP57_07225 (rnc)
Ribosome biogenesis [BR:
palg03009
]
Eukaryotic type
90S particles
RNase
HFP57_07225 (rnc)
Prokaryotic type
rRNA processing factors
HFP57_07225 (rnc)
Chromosome and associated proteins [BR:
palg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HFP57_07225 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QLC24841
LinkDB
All DBs
Position
1455287..1455958
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AA seq
223 aa
AA seq
DB search
MTDNPETDAWLADTLGHRPRDSALFERALTHPSMDEPHYQRLEFLGDRVLGLIISTWLYE
RHEGDAEGKLNSRLALLVSRTTCADIAREIGVAPHIRFGKQARDDGSADSDNVLGDVMEA
LIGALYRDAGFDAARSFVYKVWESRVEEVDRAPQHPKSALQEWAAANRAKPPVYSIVDRS
GPPHNPRFTIRVEIPNRDSAQAEGSSKQEAEKAAALALLEKLA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataatcccgaaaccgatgcctggctggccgatacgctcggccacaggccgcgt
gactccgcgctgttcgagcgcgcgcttacccatccgagcatggacgagccccattatcag
cggctcgagtttctcggcgaccgggtgctcggcctgattatctcgacctggctctacgag
cgccacgagggcgatgccgagggcaagctcaacagccggctcgccttgctcgtctcgcgc
acgacctgcgcagatatcgcgcgcgagatcggagtcgcgccgcatatccgcttcggcaaa
caggcgcgcgacgacggcagcgcggacagcgacaatgttctgggcgacgtgatggaggcg
ctgatcggcgcgctctaccgcgatgcgggcttcgatgccgcgcgctccttcgtctacaag
gtttgggaaagccgggtcgaggaagtcgatcgcgcgccccagcaccccaagagtgcgcta
caggaatgggcggccgccaaccgggccaagccgcccgtctactcgatcgtcgaccgcagc
ggtcccccgcacaatccgcgcttcacgatccgcgtcgagatcccgaaccgcgacagcgca
caagccgaaggttcgtcgaagcaggaagccgaaaaggcggccgcgctggcgctgctggaa
aaactcgcatga
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