Parasphingopyxis algicola: HFP57_09235
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Entry
HFP57_09235 CDS
T06669
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
palg
Parasphingopyxis algicola
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palg03016
]
HFP57_09235 (truB)
Enzymes [BR:
palg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HFP57_09235 (truB)
Transfer RNA biogenesis [BR:
palg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HFP57_09235 (truB)
Prokaryotic type
HFP57_09235 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QLC25188
LinkDB
All DBs
Position
1859781..1860698
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AA seq
305 aa
AA seq
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MDEPGIKPALHGWLILDKPVGIGSTPCVSAVKRALRGGGYTKVKVGHGGTLDPLASGVLP
IALGEATKLAGRMLDSDKIYDFTIGFGTETDTLDAEGEVTERSGNRPSLAELEAVLPQFT
GPIEQIPPKYSALKINGKPAYARARAGEDVEMKTRAVTVHSLVCSGLRRSTVDEIILTAH
VSKGTYIRSLARDIARALNTVGHVTMLRRSKAGPFTLKSAISLDKLDELAKSRCLEQALL
PLAAGLDDIPALSVAPDQARQLRMGQRVIGVSATAGLYLATDQSVPVALVECDGIELKVV
RGFNL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaccgggaataaaacccgccctgcatggctggctgatcctcgacaagcctgtc
ggcatcggttcgacgccgtgcgtgtcggcggtgaaacgggcattgcgcggaggcggctat
accaaggtgaaagtcgggcatggcgggacgctcgatccactcgcaagcggcgttctgccg
atcgcgctgggcgaggcaacgaagcttgccgggcggatgctcgacagcgacaagatatat
gacttcaccatcggcttcggcacggagacggacacgctcgatgccgagggcgaggtcacc
gagcgctcgggcaaccgcccttccctggccgagctcgaagcggttctgccgcaattcacc
ggtccgatagaacaaatcccgcccaaatattccgcgctcaagatcaatggcaaaccagcc
tatgcccgcgcccgggccggagaggatgtcgagatgaaaacccgagcggtgacggtacac
agtttggtctgctccggccttcgccggagcacagtggatgaaatcatccttaccgcccat
gtctccaagggcacttatatccgatccctggcgcgcgatatcgcgcgcgccttgaatacg
gtcgggcatgtcactatgttgcgccgcagcaaggccggaccctttacgctgaaaagcgcg
atttcgctggacaaactggacgaactcgctaagagccgctgccttgaacaggcactcttg
ccattggcggcagggctggacgacatcccggctctttccgtcgctcccgatcaggcaagg
cagctccgcatggggcagcgggtgatcggggtttccgccactgccgggctttatcttgca
accgaccagtctgttccggttgccctcgtcgaatgcgacgggatcgagctgaaggtggtg
cgcgggttcaatctctaa
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