Parasphingopyxis algicola: HFP57_09935
Help
Entry
HFP57_09935 CDS
T06669
Name
(GenBank) autotransporter domain-containing protein
Organism
palg
Parasphingopyxis algicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Trypsin
Motif
Other DBs
NCBI-ProteinID:
QLC25309
LinkDB
All DBs
Position
2005888..2009463
Genome browser
AA seq
1191 aa
AA seq
DB search
MSAKSSRFLSLATTTACGALALALAAPAQAIVPNDNFTPDDIIDDTGLNGVGMFFRNDGF
VCSGTLINPRTVLFAAHCVNDRPESDYGTIIRSAFSFDDDALPGFLDWINNGFTSNPGLG
VYDIAQIFYDPRSLDDPAAFGFLEADIALASLARPVTSELDPATQTLRSTIPTWALLFSP
LPTPDQITDQDGTGYHVNITGYGRSGSGTTGASVGIDWRRRAAENMLGALTSFDERNQFL
FGNPFGDLPQSLYRLDFDDPNKTNPFDFNLYKDEPREREATTAGGDSGGPLILDAANNDL
STEDLQIGVLSGGSRFFGPQVFSSYGTESFYQPLYLYWDYIVATNPYRYVSAVAGDGAWE
DPNHWVTELDPIYRIIDPTGAVVNGLPTSPGLGPEGGSPDFGEVCFDPEGANPGDGCQDL
ESGDPTPPAREIGGTLTSGIGRVTTDDLLGAPAAADPAAGDGQGEQVAETVSAPAAEASV
EIAEQQPQAAPGARAGMIMGAEHQAHGNGVEFAIEAPHNGVDLVENEAQGDGAETAEEQP
QGISGGEPEFAAGPNPAPTLDNGLPGATGFVPDNIDADVAGGVNGRYFDVTLSQDGITTL
SSAATIDRLTVTGAAGLDIATGGDLTSLIDITQTGGGINADGSLTTLGDYLLVAGMLSGN
GTVQTPFLTSVAGMIAPGGMGSIGTLTVDGNLVLASGSTLLIDLGAAPATDVLAVTGQAD
VGGNVAFAAVPGTIYTSDAAYTFLTADGGVTGTFNDGTLSAILQPIFAYTANTVEVRIDV
GSYANVVDPASAVQTAYAAILDGNRSRAGGFPDIYGFLDFTDAATIQATLEGLAPITETT
RTAIGMAATENMSRFYRDRLRAARSGGFQGGTVASIGEPIQVAAAGNLGAPWQNQIAMDS
HSDGSMMEDHGIDESMAIYLAGGYIDGSSRAMPAAISTGRDQFDGYFLAAGIEHMASEHV
LIGYSLSFSDLDANASAGQTADGQLWQGTLYGAWEMSNGLILSGQASAGVFDNETQRTVA
IGPNTFNLALQEDALAVAAEVMLGKEFGTGTVRFTPNAALRYGYLGFGNSSETGGGPAMQ
FRRGATLDSLQGRLGVDVTADTGSIRPRFNATYVHDFADTPAVFLANFVGGLGAARAPFA
LGVAQDSDWVELSGGLQIVTDSIDIDFAVDSTLWRNDVRNQTYRATATFRF
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaaatcatcccgttttctctcgctcgccacgaccacggcgtgcggcgcgctc
gcgcttgcgctggccgcaccggcacaggccatcgttccgaacgacaatttcacgccggac
gatatcatcgacgataccggtctgaacggcgtggggatgttcttccgcaatgacgggttc
gtctgctccggcacgctgatcaacccgcgcaccgttctcttcgcggcgcactgcgtgaac
gatcgcccggaaagcgattacggcacgatcatccggtcggccttctcgttcgacgacgat
gcgcttccgggtttcctcgactggatcaacaacggctttacctccaatcccggtttgggc
gtctacgacatcgcccagattttctacgatccgcggtcgctggacgatccggcggctttc
ggctttctcgaggctgatatcgcgctggccagcctggcacggccggtaacgagcgaactc
gatccggcgacgcagacgctgcggtcgacgatccccacctgggcgctgctcttctcgcca
ctccccacccccgaccagatcaccgatcaggacggcaccggctatcacgtgaacatcacg
ggctatggccgttcgggcagcggcacgaccggcgcgtctgtcggcatcgactggcgccgc
cgcgcggccgagaacatgctcggcgcgctgacctcgttcgacgaacgcaatcagttcctg
ttcgggaacccgttcggcgatctgccgcagagcctctatcgtctcgacttcgacgacccg
aacaagaccaacccgttcgacttcaacctctacaaggacgaaccgcgcgagcgcgaagcg
acgacggccggcggcgattccggcggcccgctgatcctcgatgcggcgaacaatgatctg
tcgacagaggatctgcagatcggcgtcctttcgggcggcagccgcttcttcggcccgcag
gtattttcgagctacggcacggaaagcttctatcagccgctctatctctactgggattat
atcgtcgcgacgaacccgtatcgctatgtcagcgcggtcgccggcgacggtgcctgggaa
gatcccaatcactgggtgaccgaactcgacccgatctaccggatcatcgatccgaccggc
gcggtcgtgaacggcctgccgacttcgccgggtctcgggccggaaggcggatcgcccgat
ttcggcgaagtctgcttcgatcccgagggcgcgaatccgggcgatggctgccaggatctg
gaaagcggcgaccccaccccgccagcgcgcgaaatcggcgggaccctgacgtccggcatc
ggtcgggtcacgaccgacgacctgctcggagcgcccgcggcagctgatcctgcggctggc
gacggccagggcgaacaggttgccgagacggtctcggctcccgccgccgaagccagtgtc
gaaatcgccgagcagcagcctcaggcagctcccggcgcgcgcgccggcatgatcatgggc
gccgagcatcaggcgcacggcaacggcgtcgaattcgccatcgaagcgccgcacaacggt
gtcgatctcgtcgagaacgaggcccagggcgatggcgccgaaaccgccgaagagcagccc
cagggcatcagcggcggcgagcctgagttcgcggcgggccccaatccggctccgacgctc
gacaacggccttcccggagccaccggcttcgttccggacaatatcgatgccgacgtcgcc
ggcggggtaaacggccgctatttcgacgtcacgttgagccaggacggcatcacgacgttg
agcagcgcagccacgatcgaccggctgacggtcaccggcgctgccggactcgatatcgcg
acgggcggcgatctgacctcgttgatcgacatcacccagacgggtggcgggatcaatgcc
gacggatcgctcaccacccttggcgactatctgctggttgccggcatgctctcgggcaac
ggcaccgtgcagacgcccttcctgacgagtgtcgcgggcatgatcgcgcccggcggcatg
ggaagcatcggcacgctgaccgtggacggcaatctggtcctcgcttcgggttcgacactg
ctgatcgacctcggcgcggcgcctgctaccgatgtcctcgccgtgacgggccaggccgat
gtcgggggcaatgtcgccttcgcagcggtacccggcaccatttatacgagcgacgcggcc
tacaccttcctgaccgcggatggcggcgtcaccgggacgttcaacgacggaacgctgagc
gccatcctgcagccgatcttcgcctataccgcgaacacggtcgaggtgcggatcgatgtc
ggcagctatgccaatgtcgtcgatccggcatcggctgtgcaaaccgcctatgcggcgatc
ctcgacggcaaccgcagccgcgccggcggtttccccgatatctacggcttcctcgatttc
accgatgcggcgacgatccaggcgacgctcgagggtctcgctccgatcacggagacgacc
cggacggcgatcggcatggcggcgaccgagaatatgtcgcgcttctaccgcgatcgcctg
cgcgccgcgcgctcgggcgggttccagggcggcacggtcgcctcgatcggcgaaccgatc
caggtcgccgcagccggcaatctcggcgcgccgtggcagaaccagatcgccatggacagc
catagcgacgggtcgatgatggaagatcacggcatcgacgagtcgatggcgatctatctc
gccggcggctatatcgacggcagctcgcgggctatgccggccgcgatctcgacgggccgc
gatcagttcgacggctatttcctcgccgccggtatcgagcacatggcaagcgagcatgtg
ctgatcggctattcgctctccttctcggatctggacgccaacgcatcggcgggccagacg
gcagacgggcagctgtggcagggcacgctgtacggcgcgtgggagatgtccaacgggctt
atcctgtcgggccaggccagtgccggcgtcttcgacaacgagacgcagcgcacggtcgcc
atcggaccgaacacgttcaacctggcgctccaggaagatgcgctggcggtcgcagccgaa
gtgatgctcggcaaggaattcggcaccggaacggtccgcttcacgccgaacgcggctctg
cgctacggctatctgggcttcggcaattcgtcggagaccggtggcggcccggccatgcag
ttccgccgcggcgcgacgctggacagcctccagggccgtctgggtgttgacgtcacggcc
gacacgggttccatccggccgcggttcaatgcaacctatgtgcatgacttcgccgacacg
ccggccgtgttcctcgccaatttcgtgggcggactcggcgcggcacgggcgcccttcgcg
ctcggagtggcgcaggacagcgactgggtggaactcagcggcggcctccagatcgttacc
gacagcatcgatatcgacttcgcggtggacagcactctgtggcgcaacgacgtgcggaac
cagacctatcgggcgaccgcaacgttccgcttctag
DBGET
integrated database retrieval system
