Parasphingopyxis algicola: HFP57_11295
Help
Entry
HFP57_11295 CDS
T06669
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
palg
Parasphingopyxis algicola
Pathway
palg00300
Lysine biosynthesis
palg00470
D-Amino acid metabolism
palg01100
Metabolic pathways
palg01110
Biosynthesis of secondary metabolites
palg01120
Microbial metabolism in diverse environments
palg01230
Biosynthesis of amino acids
Module
palg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HFP57_11295 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HFP57_11295 (lysA)
Enzymes [BR:
palg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HFP57_11295 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QLC25544
LinkDB
All DBs
Position
complement(2286318..2287580)
Genome browser
AA seq
420 aa
AA seq
DB search
MDHFSLRDGVLHAEDVPLARIAEEVGTPVYVYSRATLERHARVFRDALSGLSRVHIAFAI
KANPNLAVLRVLSREGFGADIVSIGEMKRALAAGIEAADIVFSGVGKTRAELREALDAGI
GQFNIELEEEGVAIAEFARSLGKTATAVLRVNPDVDAGTHAKISTGMKDNKFGVPIDEAA
EIFARLEALDGLDMRGLALHIGSQIFDLAPIERAYAKVGALVMQLRAAGHTIDRVDLGGG
LGVPYERDKVPPPPAVYGEMVARVTKDWDVTLMFEPGRVIVGNAGILLTRVIWVKPGVVR
PYVIVDAAMNDLARPAMYDAWHDFEAVEPTGERMIANIAGPVCESGDTFAMGRDIDAVKA
GDLAVFRTAGAYGATMASTYNSRALVPEVMVDGSEFAIVAERVMPEALIAAEHVPEFLKD
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaccatttctcgctccgtgacggcgtgctgcatgccgaggatgtgccgctggcgcgc
atcgccgaggaagtgggcacgcccgtttacgtctattcgcgcgcgacactcgagcgccat
gcccgagtcttccgtgacgcgctgtccggtctatcgcgtgttcacatcgctttcgcgata
aaggccaatcccaatctcgcggtgctgcgcgtgctgtcgcgagagggttttggcgccgac
atcgtctcgatcggcgagatgaagcgcgcgctggcggcgggcatcgaggcggccgatatc
gtcttctccggtgtcggcaaaacgcgggcggagctgcgcgaggcgctcgatgccggcatc
ggtcagttcaatatcgagctggaggaggaaggcgtcgccatcgccgaattcgctcggagc
ctgggcaagaccgcaaccgccgtcctgcgcgtcaatccggacgtcgacgccggtacgcat
gccaagatctcgaccggcatgaaggacaacaagttcggcgtgccgatcgacgaggcggcg
gagattttcgcgcggctcgaggcgctggacggactggatatgcgaggcctcgccctgcat
atcggcagccagatcttcgatcttgcgcccatcgagcgcgcctatgcgaaggtcggcgcg
ctcgtgatgcagttgcgtgcggcgggacacacgatcgaccgggttgatctcggcggcggg
ctcggcgtgccctatgaacgagacaaggtcccgcccccgccggccgtctatggcgagatg
gtcgcgcgggtgacgaaggattgggacgtcacgctcatgttcgagcccggacgcgttatc
gtcggcaacgcgggcattctgctgacgcgcgtcatctgggtgaaaccgggcgtcgtccgg
ccctatgtcatcgtcgacgcggcgatgaacgacctcgcccgcccggccatgtacgatgcc
tggcatgatttcgaagcggtcgagccgacgggagagcgcatgatcgccaatatcgccggc
ccggtctgcgagagcggcgataccttcgccatgggccgcgatatcgacgcggtgaaggcc
ggcgaccttgccgtcttccgcaccgccggcgcctatggcgcgaccatggcgagcacctat
aacagtcgcgccctagtgcccgaggtgatggtcgacggcagcgaattcgcgatcgtggcc
gagcgggtcatgccggaagcgctcatcgccgccgagcacgtgccggaatttttgaaggac
tga
DBGET
integrated database retrieval system