Parasphingopyxis algicola: HFP57_11795
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Entry
HFP57_11795 CDS
T06669
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
palg
Parasphingopyxis algicola
Pathway
palg03030
DNA replication
palg03430
Mismatch repair
palg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HFP57_11795 (dnaQ)
03430 Mismatch repair
HFP57_11795 (dnaQ)
03440 Homologous recombination
HFP57_11795 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palg03032
]
HFP57_11795 (dnaQ)
03400 DNA repair and recombination proteins [BR:
palg03400
]
HFP57_11795 (dnaQ)
Enzymes [BR:
palg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HFP57_11795 (dnaQ)
DNA replication proteins [BR:
palg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HFP57_11795 (dnaQ)
DNA repair and recombination proteins [BR:
palg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HFP57_11795 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Rv2179c-like
DUF3131
Motif
Other DBs
NCBI-ProteinID:
QLC25634
LinkDB
All DBs
Position
complement(2384522..2385232)
Genome browser
AA seq
236 aa
AA seq
DB search
MREIVFDTETTGLSPTDGHRLVEIGALEMVNRVETGRSFHIYCNPEREMPSEAFEVHGLS
DAFLANKPMFSVEAQNFIDFIEDSPLVAHNAQFDFGFLNAELERAGHAAVGMERMIDTLA
IARTKHPGAKHSLDALCTRYGVDRSQRVLHGALLDAQLLAQVYVELTGGRQIGLVLAEET
AESGSAETRMVDRTPAPGRPVREPRPHAASPEEQARHAAFIARLTDPLWAERQAKG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaatagttttcgatacggaaaccaccggcctcagcccgacagacgggcacaga
ctggtggaaattggcgcgcttgaaatggtcaaccgggtcgaaaccgggcgcagcttccac
atttattgcaatcccgagcgcgagatgccgagcgaggcgttcgaggtccatgggctgtcc
gacgcctttctcgccaacaagcccatgttttcggtcgaggcccagaattttatcgatttc
atcgaagacagcccgctcgtcgcgcataatgcgcagttcgatttcggcttcctgaacgcc
gagcttgaacgtgcgggtcatgccgcggtcggcatggagcggatgatcgacaccctggcg
atcgcgcggaccaagcatccgggcgccaaacacagtctcgacgccctttgcacgcgctac
ggggtggaccgcagccagcgcgtccttcatggcgcgctgctcgacgcgcagttgctcgcg
caggtctatgtcgagctgacgggcgggcggcagatcggtctcgtgctggccgaagaaacg
gctgagagcgggtccgcggaaacgcgtatggtggatcggacgccggcgcccggccgcccg
gtccgcgagccgcgcccgcatgccgcatcgccggaagaacaggcgcgccacgccgcattt
atcgcccggctgaccgacccgctatgggccgaacggcaggcgaagggttga
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