Parasphingopyxis algicola: HFP57_12480
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Entry
HFP57_12480 CDS
T06669
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
palg
Parasphingopyxis algicola
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
palg02000
]
HFP57_12480
Transporters [BR:
palg02000
]
Other transporters
Pores ion channels [TC:
1
]
HFP57_12480
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QLC25750
LinkDB
All DBs
Position
complement(2509858..2511771)
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AA seq
637 aa
AA seq
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MTILTKSVAASALLLPAAAMAQTAPGDPELVVTGTRAPDPVPADQLGASLTVIDDEALTQ
RQAREIADILRDVPGLAVSGVAGQTQVRIRGTEANHTLVLIDGIEVSDPFFGEFDFGSLA
IDSAARIEVLRGQQSALYGSDAIGGVIHYITLTGREAPGPQLRAEGGSFGTFNAAARYAG
VAGDVDYAISATHLGTDGTVGTRGGMRDLDKRTNSVSVNALWTPASNTRLRFVGRWSNTE
SEFNNQDFTPGSPTFGFAVDSPGTYVENRGLYALVGGEVDLLDGRWTHALTGQIADIDRD
GFSNDVPDSGNEGQRLKASYVSSLRLGTEALRHTITFAGDWERERFRNTTPGGFAFTGRR
QIRNLGLVAEYGLVAGDRLAFDAALRFDDNSRFDDTLTYRVQGSYRFDFGLRARAAAGSG
IKNPGFFELFGFVDGRFIGNAALKPERSEGWEIGLEQELADGAVTIGATYFDSTLEDEIF
TDFPPPDFLATPVNRTTESRQHGVETFLRARLGPQWRIDASYTRLTARENGTREIRRPRD
TANVAIAWTAPEERGGLTLVIRHSGSQTDNAFLDPSFVPTTVTLDSFTLVSLAGSLRLIE
GVELTARVENLFDEEYEQIFSFTNPGIGAFAGVRARF
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgactatcctgaccaaaagcgtagccgcctcggcactgctgcttcccgccgccgccatg
gcgcaaacagcccccggcgatcccgaactcgtcgtgaccggcacccgggcgcccgacccg
gtgcccgccgaccagctcggcgcctcgctgaccgtgatcgacgatgaagcgctgacccag
cgccaggcgcgcgaaatcgccgatatattacgcgacgtgcccggcctcgcggtctccggc
gtcgccggccagacccaggtccggatccgcggcaccgaggccaatcacacgctcgtgctc
atcgacggcatcgaagtgtcggacccgtttttcggcgagttcgatttcggcagcctcgcc
atcgattctgcggcgcggatcgaggtcctgcgcggccagcagagcgcgctctacggctcg
gacgcgattggcggcgtgatccattacatcacgctgaccgggcgcgaggcgccgggtccg
cagctgcgcgcagagggcggctcgttcggcacgttcaacgccgccgcgcgctatgccggg
gtagcgggcgatgtcgactatgcgatctccgccacccatctcggcaccgacggtacggtc
ggaacacgcggcgggatgcgcgacctcgacaagcgcacgaacagcgtctcggtcaacgcg
ctctggacgcctgcgtccaatacgcggctgcggttcgtcggccgctggtcgaacaccgaa
agcgagttcaacaaccaggatttcacgcccggcagcccgaccttcggctttgcggtcgat
tcgcccggcacctatgtcgaaaatcgcgggctctacgcattggtcggcggcgaggtcgac
ctgctcgacggccgctggacccatgcgctgaccgggcagatcgccgatatcgaccgggac
ggcttcagcaacgacgtgccggactcggggaatgaggggcagcggctcaaggcctcctat
gtctccagcctgaggctgggcaccgaggcgctccgccacaccatcaccttcgccggcgac
tgggaacgcgagcgcttccgcaacacgacgccgggcggtttcgccttcacgggccgccgc
cagatccgcaatctcggcctcgtcgccgaatatgggctggtcgcgggcgaccggctggcc
ttcgacgccgcgctgcggttcgacgacaattcgcgtttcgacgatacgctgacctaccgc
gtgcagggcagctaccgtttcgatttcggcctgcgcgcccgcgccgccgcgggatcgggg
atcaagaatccgggattcttcgaactgttcggctttgtcgacggacgctttatcggcaat
gcggcgctgaagcccgaacgctccgaaggctgggagatcggcctcgaacaggaactcgcc
gatggcgccgtcacgatcggcgcgacctatttcgacagcacgctggaagacgagatcttt
accgatttcccgccgcccgacttcctcgccacgcctgtcaaccgcacgaccgaatcgcgc
cagcacggcgtcgagacgttcctgcgcgcccggctcggcccgcaatggcggatcgatgcg
agctatacccggctcacggcgcgcgaaaacggcacgcgcgaaatccggcggccgcgcgat
acggccaatgtcgcgatcgcctggacggcgccggaagagcgcggcgggctgacgcttgtc
atccggcacagcggatcgcagaccgacaacgcttttctcgaccccagcttcgtcccgacg
accgtcacgctcgacagcttcacgctcgtctcgctggccgggtcgctccggctgatcgag
ggcgtcgagctgacggcccgcgtcgagaatctgttcgatgaggagtatgagcagattttc
agcttcaccaatccgggcatcggcgcctttgccggcgtccgcgcccggttctga
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