Parasphingopyxis algicola: HFP57_14010
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Entry
HFP57_14010 CDS
T06669
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
palg
Parasphingopyxis algicola
Pathway
palg03030
DNA replication
palg03430
Mismatch repair
palg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HFP57_14010
03430 Mismatch repair
HFP57_14010
03440 Homologous recombination
HFP57_14010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palg03032
]
HFP57_14010
03400 DNA repair and recombination proteins [BR:
palg03400
]
HFP57_14010
Enzymes [BR:
palg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HFP57_14010
DNA replication proteins [BR:
palg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HFP57_14010
DNA repair and recombination proteins [BR:
palg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HFP57_14010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QLC26029
LinkDB
All DBs
Position
complement(2818598..2819278)
Genome browser
AA seq
226 aa
AA seq
DB search
MIFGRRGRFERQRNRAAASAKGTPLEDFYAIDPPDFAADADAVEMIAIDLETDGLDAAQD
AILEAGWVGLTSRTIRAATAGRLRFRPDCRLSEQSVVIHQIMDDEAADGLAEAEALATLL
AALAGAPLVAHFAEIERGFLDAACRRCFGAPFVAPFICTMQLEQRWYPATRAADGLRLGK
LRARHGLPAYRAHDGLTDALACAELFLAQRAKRGDAPVRLGDLLAR
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgattttcggcagacgtgggcggttcgagcgccagcgcaaccgcgccgcggcgagcgcg
aagggcacgccgctcgaggatttctacgcgatcgacccgccggattttgcggccgatgca
gacgctgtcgagatgatcgcgatcgatctcgaaaccgacgggctcgatgcggcgcaggat
gcgatcctggaggccggctgggtcggcctgacgtctcgcaccatccgcgccgcaacggcc
gggcggctgcgcttccggcccgattgcagactcagcgagcaaagcgtcgtcatccaccag
atcatggacgatgaagcggccgatggtcttgccgaagccgaagcgctcgcaacgttgctc
gccgcgctggcgggcgcgccgctggtcgcgcatttcgccgagatcgagcgcggctttctc
gacgccgcctgccgccgctgtttcggtgcgccgttcgtcgcgccgtttatctgcaccatg
cagctcgaacagcgctggtatccggcgacgcgcgcggcggacggcttgcggctcggcaag
ctgcgcgcgcgccacggcctgcccgcctatcgcgcgcatgacgggctgaccgacgctctg
gcatgcgccgagctgttcctcgcccagcgcgcgaaacgcggcgacgcgccggtgcggctc
ggcgatctcctcgcccgttag
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