Parasphingopyxis algicola: HFP57_15945
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Entry
HFP57_15945 CDS
T06669
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
palg
Parasphingopyxis algicola
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palg03000
]
HFP57_15945
Transcription factors [BR:
palg03000
]
Prokaryotic type
Helix-turn-helix
IclR family
HFP57_15945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
IclR_C
MarR_2
TrmB
MarR
HTH_24
GAF
PCI
Dimerisation
Topoisom_bac
Motif
Other DBs
NCBI-ProteinID:
QLC26374
LinkDB
All DBs
Position
complement(3213425..3214225)
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AA seq
266 aa
AA seq
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MSKGVPIRSVKRALDVLRVINHYGSLTMMEISKQAGVPYPTANRIVQTLISENYLEREPD
RKRYRPTALVQTLAHGFQDHSGLVEVARPHMEELTRNLHWPVSLVTRVGEMMVVRDCTHA
ISPLTFDTYYPGASFPILDCASGQVYLAHCDDREREQLLAALPESGVAYNPVIAENMRLG
IRAEEIRSAGYLVSGHNQFTTTPGRTSSIAVPVLHDGKIVASLVIICFANSLNLDVALEQ
YLPSLKNAATAIGRELGFEKDGEIAA
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaggtgttccgatacgatctgtcaaacgcgcactcgatgtgctccgcgtgatc
aaccattacggttcgctgacgatgatggaaatctcgaagcaagccggcgtcccttacccc
actgccaatcgaatagttcaaacgctgatctctgaaaactatcttgagagggagccggac
cggaaacggtaccggcccaccgctttggtgcagactctggcccatggattccaagatcac
agtggcctcgtcgaggtcgcgcgtcctcatatggaggaactcactcggaatctgcactgg
ccggtttcgctcgtaacccgggtgggcgagatgatggtggttcgggactgcacgcacgca
atctcgccgctcactttcgatacctattatcccggcgcatcctttccgatactcgattgc
gcctcgggtcaggtttacctcgcccactgcgatgatcgggaacgcgaacagcttctcgct
gcgctcccggaatctggtgtcgcctataatcccgtgatcgccgaaaatatgagattgggg
atacgggcagaggaaatccggtctgcgggatatctcgtcagcgggcacaatcagttcacg
acgacgcccggccgcacttcgtcgatcgccgtgcccgtattgcatgacgggaagatagtg
gcctcactggtcatcatatgtttcgctaactccctgaatctggacgtggcactcgagcaa
tatctgccgtcattgaaaaacgcggcgacggctatcgggagagaattgggcttcgaaaaa
gacggagaaattgcagcctga
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