Parasphingopyxis algicola: HFP57_16565
Help
Entry
HFP57_16565 CDS
T06669
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
palg
Parasphingopyxis algicola
Pathway
palg00630
Glyoxylate and dicarboxylate metabolism
palg00680
Methane metabolism
palg01100
Metabolic pathways
palg01120
Microbial metabolism in diverse environments
palg01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HFP57_16565 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
HFP57_16565 (fdhF)
Enzymes [BR:
palg01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
HFP57_16565 (fdhF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_Nqo3
Fer4_21
Fer4_10
Fer4_7
Fer4
Fer4_9
Fer4_6
Fer4_2
Fer4_8
Motif
Other DBs
NCBI-ProteinID:
QLC26485
LinkDB
All DBs
Position
complement(3379184..3381892)
Genome browser
AA seq
902 aa
AA seq
DB search
MVIRHRESDVPTLKIDGETVTAVAGKSLLEAAREAGIALPALCSDARCDAIGSCRLCLVE
IQGRGELVTACETPVEDGMWVATATTDLEEYRATMLGWYAERIAPEDFTAYPDKYLHRLM
RRYGVAPAGKPADAERYDVSIPQIRVDMEQCVDCLRCVRICEEVQGDFVWHEIDRGDQSH
IVPKRGILLAEGGCVACGACVDSCPTAALVDTDAGIAETWTRTTCAYCGVGCELEIGSAA
GRIVASRPAMDAPVNKGHACAKGRYGFDFVHSPDRLTQPMISGPGGWRAASWDEALDACA
ARLQAIIADHGPDTIGILASSRSTNEDSYLAQKFARLVVGTHNVDCCARVCHTPTAAAMK
AMLGAGAATNSFDDIEQAATILVAGANPLECHPVIGARIRQQVLRGKAKLIVVDPRRAGL
AEIATIHLPLKPGTDIPLQNAIAHVILEEELHDRECARTRITGFAEFAAHVAEWTPERAA
EICELPADDIRAAARLYATETPSYCAHGLGVTEHVQGTEGVMGLCNLALITGNIGKPGAG
VNPLRGQNNVQGTAHMGCDPGILAGAQRLKDARGAFEAAWGQKLPAKPGLHLMEMIDAAE
AGTLKGLVVIGYDIAATLANEYAVARALARLDTVIVVDLFMTETARRFGHILLPAASAFE
KDGTFMNAERRIQRVRTIVEPPGAARTDWQILCSLAARMGHAADFDYDSPEAIWDEIRAL
WSAAAGIDYARLDRQGLQWPCPDEDHPGTAILHEKVFGHGKKAALRPLHFRPSPEQTDTD
YPLLLTTGRALHQFNIGTMTGRTRQRQLRPTDRLDISPSDAREIGISNGDIVTVESRYGA
AELPARIDTGLRDGRLFATFHDPARHVNAVTGPVRDRMVGAPEYKRTAVRVRRGDQTSTR
SV
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggtgatccgtcatcgggagagcgatgtgccgacgctgaagatcgatggcgagaccgtc
accgcggtggcaggcaagagcctgctcgaagccgcgcgggaggccggcatcgccctgccc
gccctgtgcagcgatgcgcgctgcgacgcgatcggatcctgccgcctgtgtctcgtcgag
atccagggccgcggcgagctcgtcaccgcgtgcgaaaccccggtcgaggacggcatgtgg
gtcgccacggccaccaccgatctcgaggaatatcgagcgaccatgctcggctggtatgcg
gagcggatcgcgcccgaggatttcacagcctatcccgacaaatatctgcaccggctgatg
cggcgctacggtgttgcgcccgccgggaaaccggccgatgccgagcgatacgacgtctcg
attccgcagatccgcgtcgacatggaacagtgcgtcgattgcctgcgctgcgtgcgcatc
tgcgaagaagtgcagggcgatttcgtctggcacgagatcgaccggggcgatcagagccat
atcgtgcccaaacgcggcattcttctcgccgaaggcgggtgcgtcgcctgcggcgcctgc
gtcgacagctgcccgaccgcggcgctcgtcgataccgatgccgggatcgccgagacgtgg
acgcgcacgacctgcgcctattgcggcgtcggatgcgaactggagatcgggtcggcggcc
gggcggatcgtggcgtcgcgccccgcaatggatgcaccggtgaacaagggccatgcctgc
gccaaggggcgatacgggttcgatttcgtgcacagtcccgaccggctcacgcagcccatg
atatcgggacctggcggctggcgcgcggcaagctgggacgaagcactcgacgcctgtgcg
gcccggttgcaggcgatcatcgccgatcatggccccgacactatcggcattctcgcctcc
tcgcgctcgacgaacgaggacagctatctggcgcagaaattcgcgcggctggtggtcggc
acccacaatgtcgattgctgcgcgcgggtctgtcacacgccgacggctgcggcgatgaag
gcgatgctcggcgcgggcgcggcgaccaacagtttcgacgatatcgagcaggccgcgacc
atcctggtcgccggggccaatccgctcgaatgccatccggtgatcggcgcgcgcatccgg
caacaggtcttgcgcggaaaggcgaagctcatcgtcgtcgatccgcgccgcgcgggactg
gcggagatcgccacgatccatctgccgctcaagcccgggacggacatcccgctccagaac
gcgatcgcccatgtgatactcgaagaggagctgcacgaccgcgagtgcgcccggacgcgg
atcaccggctttgcggagttcgccgcgcatgtcgcggaatggacgcccgaacgcgcggcg
gagatttgcgagctgccggccgacgatatccgcgccgcggcgcggctctacgcgaccgaa
acgccgtcctattgcgcccatgggctcggggtgaccgagcatgtccagggcaccgaaggc
gtgatgggtctctgcaacctggcgctgatcaccggcaatatcgggaagcccggcgcgggg
gtgaaccccctgcgcgggcagaacaatgttcagggaaccgcgcatatgggatgcgatccc
ggcatccttgccggggcgcagcggctcaaggatgcgcgcggcgcgttcgaggcggcatgg
ggccaaaagctgccggccaagccgggcctgcatctgatggagatgatcgacgcggccgaa
gccggcacgctgaaggggctcgtcgtgatcggctatgatatcgccgcgacgctggccaac
gaatacgccgtcgcccgcgcgctcgcccggctcgacacggtaatcgtcgtcgacctgttc
atgaccgagaccgcccggcgtttcggccatatcctcctgcccgcggcctcggcgttcgaa
aaggacggcacgttcatgaatgccgaacggcgtatccagcgcgtgcgcacgattgtcgaa
ccgccgggcgcggcccggaccgactggcagatcctctgctcgctcgccgcgcggatgggt
catgcggccgatttcgactatgattcgcccgaggcgatatgggacgagatccgcgcgcta
tggtccgcggctgccgggatcgactatgcgcggctcgatcggcaggggctgcaatggccc
tgccccgacgaagaccatcccggcacggcgatcctgcacgaaaaggtcttcgggcacggc
aagaaggccgcgttgcgccccctgcacttccggccgtcgcccgaacagaccgataccgac
tatccgctgctactgacgaccgggcgggcgctccaccagttcaatatcggcacgatgacc
ggacgcacccggcagaggcagctgcgcccgaccgacaggctcgatatctcgccgtcggac
gcgcgcgagataggcatatcgaacggcgatatcgtaacggtcgagagccgctacggcgca
gccgagcttccggcgaggatcgacaccggcctgcgggacggccgcctgttcgcgacgttc
cacgatccggcgcggcacgtgaacgccgttaccggcccggtccgggaccgcatggtcggc
gcacccgaatacaagcgcaccgccgtccgggtccgccgtggcgatcagacctcgacacgc
tcggtgtga
DBGET
integrated database retrieval system
