Parasphingopyxis algicola: HFP57_17095
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Entry
HFP57_17095 CDS
T06669
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
palg
Parasphingopyxis algicola
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palg03400
]
HFP57_17095
Enzymes [BR:
palg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
HFP57_17095
DNA repair and recombination proteins [BR:
palg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
HFP57_17095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
QLC26582
LinkDB
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Position
3504224..3505759
Genome browser
AA seq
511 aa
AA seq
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MPDKGPILIPILGDQLSRGISSLDGVDPDDAVLLLMELDEETGYVRHHKAKIAFILSAMR
HHAEDMRTRGWTVDYVKLDDPDNSGSFSGEVARAIERHGPSRIRVTEAGEWRVRAMIEKW
EDKFEIPVEICPDTRFLCDHKEFEDWAAGRKQLRMEYFYREMRRKTGLLMDGDDPEGGKW
NYDQDNRKPADPDLFMPKPISFRPDDTTRAVLDLVAERFPDHPGSLDHFQFAVTHEEALR
ARRHFLDECLARFGDYQDAMLTGEPFLYHSLLSPYLNVGLLDPLDLCREAEKKYVQGEAP
LNAVEGFIRQIIGWREYVRGIYWREGPDYAARNFLDAERDLPDFYYSGETDMHCLSQAIG
QTLDHAYAHHIQRLMITGTFALLAGIDPRQLHIWYLEVYADAYEWVELPNTLGMSQFADG
GLLASKPYAASGNYINKMSDYCSHCRYDVKAKTGADACPFNALYWDFLARNEDKLGDNRR
LAMPYRTWEKKEKGEKIALRNSARAFLESLD
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgccagataaaggccccatcctgatcccgatcctgggcgaccagttgagccgcggcata
tcctcgctcgacggcgtcgatccggacgacgcggtgctgctgctgatggagctggacgag
gagacgggctatgtccggcaccacaaggcgaagatcgccttcattctctccgccatgcgc
caccatgcagaggatatgcgcacgcgcggctggaccgtcgactatgtgaaactcgacgat
cccgataacagcggcagcttttccggcgaagtcgcgcgcgcgatcgagcggcatgggccg
tctcgcattcgcgttaccgaggcaggggaatggcgcgtcagggcgatgatcgagaagtgg
gaggacaagttcgaaataccggtcgaaatctgtcccgacacgcgctttctatgtgatcac
aaggagttcgaggactgggccgcgggccgcaagcagctccgcatggaatatttctaccgc
gagatgcgccggaaaaccggactgctgatggatggcgacgatcccgaaggcggcaagtgg
aattacgaccaggacaatcgcaagcccgccgatcccgatctgttcatgcccaagccgata
tccttccggcccgacgacacgacccgggccgtgctcgatctggtcgcagagcgcttcccc
gatcatccgggcagtctcgatcatttccagttcgcggtaacccatgaagaggcgctgcgc
gcgcgccgccatttcctcgacgagtgcttggcccgcttcggcgactatcaggatgcgatg
ctgaccggcgagcctttcctctaccactcgctgctgtcgccgtatctgaacgttggcctg
ctcgatccgctcgatctgtgccgcgaggcggagaagaaatacgtgcaaggcgaggcgccg
ctcaacgcggtcgagggcttcatccggcagatcatcggctggcgcgaatatgtgcgcggt
atctattggcgcgagggcccggactatgccgcacgcaatttcctcgacgccgaacgcgac
ctgcccgacttctactattcgggcgaaaccgacatgcattgtctgtcgcaggcgatcggc
cagacgctcgaccatgcctatgcccatcacatccagcggctgatgatcaccggcaccttc
gcgttgctcgccgggatcgatccgcgccagctccatatctggtatctggaagtctatgcc
gatgcctatgaatgggtcgaacttccgaacacgctcggcatgagccagttcgccgatggc
gggctgctggcctcgaagccctatgcggcttcagggaattacatcaacaagatgtccgac
tattgcagccattgccgttacgatgtgaaggcgaagacgggcgcggatgcctgcccgttc
aacgcgctctattgggactttctcgcccggaacgaagacaagctcggagacaatcgccgt
ctcgccatgccgtaccggacatgggagaaaaaggagaagggcgagaagatcgccttgaga
aacagcgcgcgggcctttctggaatccctcgactag
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