Pantoea alhagi: B1H58_02060
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Entry
B1H58_02060 CDS
T05014
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
palh
Pantoea alhagi
Brite
KEGG Orthology (KO) [BR:
palh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palh03400
]
B1H58_02060
DNA repair and recombination proteins [BR:
palh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B1H58_02060
Archaeal homologous recombinant proteins
B1H58_02060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
SMC_N
AAA_21
cobW
nSTAND3
DUF2284
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ARJ40900
UniProt:
A0A1W6B1E7
LinkDB
All DBs
Position
428123..431797
Genome browser
AA seq
1224 aa
AA seq
DB search
MKILSLRFKNINSLKGEWKIDFTREPFASSGLFAITGPTGAGKTTLLDAICLALYHETSR
LGKISQTQNELISRDTAECLAEVEFEVKGEAWRAFWSQNRARGAVDGNLQAPRVELARCA
DNVIVADKVKDKLEMIAQLTGLDFARFTKSMMLSQGQFAAFLNADANDRAELLEELTGTE
IYGQLSSRIYEQHKQARVELDQLRARAAGMALLDEATRIALESEIAALAQQENQLHLQLN
TLRQQQQWLSQQQRLEQEKNQARNAQQQAENNWQCAEAERQKLARSEPAEKLRPLWQQRQ
QLQQDLAQLNQQAQQLSASIQQASEQLQTLQNKQQQAEQAQQQLNTQWRQQECLINEQVI
PLDHQIDKLTQQLGLQQQTLQENQQALQQRQQRQQQLSSEHQTLHTQQQQEQQWRSDHAQ
VVNWGDLLGGWRARFQQQQQLQENLSILQTRQRQHQQQCDEQQQQLAQLMAQAAPLESEL
ELARQQVQQAEQALTALQQQPESTLRHQLEQLQQQRPLRQQLAIVSSTLRPLSQRYAQQQ
QELQALDAQILLQTQQLTEQRQAWKEKHQHRVDLEKRLELERRIVSLEQERARLVAGEPC
ALCGSTEHPAVERYQTLTLTENQQRLEEIRQQEEQLKIAGVTCSEQLKALQSQQARLSQQ
QQTLHGELLRQQDEWQTLLAAANLALTLEDEAALSAWIGQQEQQEQRLQQQLQRLEQAAR
SVQQAKEALAACQQRWQQQQQARQLAEQQLRYSQQQRQDAEQQCQQLAAQRQQFTETLAQ
ELAQHQLTPPEPQAEQAWLEARQNEWRRWQKSEQVLTDIAMRLAACDTALNAINEELIQL
VQQKQRAETLMQSQQQQLEALRQQRHGLLGDSTIAEVRQQWQQRLLQAENQAREQQQRWQ
QSQNQLNNLTGQHNSLMQQLQATQKRYDEQLMQFNQALETSHFSDEAAFRAALLDEQETQ
ALRERCQQLEVQRQQATTLAIRAEQSLAQHELERPDDVNLTLPELEAVLATQQQLLHDTV
RQQGQLRQQLESDNAQRQQQQSLLQQIEENTQQVEDWGYLNQLIGSSSGDKFRRFAQGLT
LDHLVWLANQQLDRLHGRYLLQRKSSDTLELQVMDTWQADAKRDTRTLSGGESFLVSLAL
ALALSDLVSHKTRIESLFLDEGFGTLDADTLDTALDALDALNASGKTIGVISHVEAMKER
IPVQIKVRKVNGLGYSRLERQFSV
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttgtccctgcgttttaaaaacatcaactcgctcaaaggcgaatggaaaatt
gatttcacccgcgagccttttgccagcagcggacttttcgccatcaccggcccaaccggt
gccggtaaaaccaccctgcttgatgcgatttgcctggcgctttatcacgaaacgtcgcgt
ctggggaaaatatcccaaacgcaaaatgagctgatcagccgcgataccgccgaatgcctc
gccgaagtggaatttgaggtgaaaggtgaagcctggcgcgccttctggagccagaaccgg
gcgcgcggcgcggtagacggcaatctgcaggcgccgcgcgtggagctggcgcgctgtgcg
gataacgtcatcgtcgctgataaggtgaaagataagctggagatgatcgctcagttaacc
ggtctcgattttgcccgctttaccaaatcgatgatgctgtcgcagggacaatttgccgcc
ttcctgaacgctgacgccaacgatcgtgccgagctgctggaagagctgaccggcactgag
atttacggtcagctctcatcgcgtatttatgagcaacataaacaggcgcgcgtggagctg
gatcagcttcgggcacgcgccgctggtatggcgctgctggatgaagcgacgcggatagcg
ctggaaagtgaaatagcggcgctggcgcagcaggaaaaccaactgcatcttcagcttaac
acgctacgacagcagcagcagtggctgagtcagcagcaacgtctggagcaggaaaaaaac
caggcgcgcaacgcgcagcagcaggcggaaaataactggcaatgcgccgaggcggaacgt
cagaaactggcgcgatcggaaccggcggaaaaactgcgtccgctctggcagcagcgtcag
cagctacagcaggatctggcacagcttaaccagcaggcacagcagctctccgcttcaatt
cagcaggccagtgagcagttacaaactttacagaacaaacagcaacaggctgaacaggca
cagcagcagctgaatacgcaatggcgacagcaggaatgtctgatcaacgaacaggtgatc
ccgcttgaccatcaaattgataagctgacgcagcagcttggccttcagcagcaaacgctg
caggaaaaccaacaggcgctacagcagcgccaacagcgtcagcagcagttgagcagtgaa
catcagacgctgcatacgcaacagcagcaagagcaacagtggcgcagcgatcatgctcag
gttgtgaactggggcgatctgctgggcggctggcgtgcgcgttttcagcagcagcaacag
cttcaggaaaacctgagcatattgcagacccggcagcgccagcatcagcaacagtgcgac
gaacagcaacagcagcttgcgcaactgatggctcaggccgctccgctggaaagcgaactg
gagctggcgcgccagcaggtacagcaggcagagcaagcacttactgcacttcagcaacag
ccggaaagcacgctgcgtcaccagctggagcagctacagcagcagcgaccgctgcggcag
cagctggctatcgtctcctctacgctgcgcccgctgagccagcgttacgcccagcaacag
caggagctgcaggcgctggatgcgcagatcctgctacaaacgcagcagcttacagagcag
cgtcaggcgtggaaagagaagcatcagcatcgcgtcgatctggaaaagcgtctggagctg
gaacgccgcattgttagtcttgagcaggaacgcgcgcgcttagtcgccggtgagccttgc
gcattatgcggatccaccgagcatccggcggtggaacgctaccagacgctgaccttaacg
gaaaatcagcagcgccttgaagagatacgccagcaggaagagcagttaaaaatagccggc
gtcacctgtagcgaacagctaaaggcgttacaaagccagcaggcgcggctaagccagcag
cagcagacgcttcatggcgagctgttgcgccagcaggatgaatggcaaacgctgctggca
gcggcgaacctggcgctgacgctggaggatgaagcggccctcagcgcctggatcggccag
caggagcagcaggaacagcggctacagcagcagcttcagcggctggaacaggctgcccgc
agcgtgcagcaggcaaaagaggcgctggcggcctgtcagcaacgctggcaacaacagcaa
caggcgcgccagctggcggaacaacagctgcgctacagccagcagcagcggcaggatgcg
gaacagcagtgtcaacaactggcggcgcagcggcaacagttcacagaaacgctggcacag
gaactggcacagcatcagcttacaccgccggagccgcaggccgagcaggcgtggctggaa
gcgcgtcagaacgaatggcggcgctggcagaaaagcgagcaagtgcttacagatatcgca
atgcgcctcgccgcctgcgatacggcgctgaatgcgatcaatgaagaactgatccaactg
gtgcagcaaaaacaacgcgcagaaaccctgatgcagtcacagcagcaacagctggaggcg
ctgcgtcagcaacgccacggcctgttgggtgacagcacgattgccgaagttcgtcagcag
tggcagcaacgtctgttgcaggcggaaaatcaggcgcgtgaacagcaacagcgctggcag
caaagtcagaaccagttaaataatctgaccggacagcataattctctgatgcaacagctc
caggccacacagaaacgttacgacgagcagttaatgcagtttaaccaggcgctggaaacg
agccactttagcgatgaagcggctttccgcgccgcactgctggatgagcaggagacgcag
gcgctgcgtgagcgctgtcagcagctggaggtgcagcgtcagcaggccacgacgctggcg
atacgcgctgaacaaagcctggcgcagcatgagcttgaacgtcctgatgatgtgaacctc
acgctgccggagctggaagccgtgctggccacgcagcagcagctattgcatgacacggtt
cgtcaacagggccagcttcgtcagcaactggagagcgataatgcgcagcgtcagcagcag
cagagtttgctgcagcaaattgaagagaatacccagcaggtcgaagactggggttacctt
aatcagctgatcggctccagcagcggcgataaattccggcgctttgcgcagggcctgacg
cttgatcacctggtctggctggcgaatcagcagcttgatcgcttgcatggacgttatctg
ttgcagcgtaaatcaagcgataccctggagctgcaggtaatggatacctggcaggctgat
gcgaagcgggatacgcgcacgctgtcgggcggcgaaagcttcctggtaagcctggcgctg
gcgctggcgctttccgatctggtcagtcataaaacccgaattgaatccctgttccttgat
gagggattcggcacgctggatgcggatacgctggataccgcgctggatgcgctggatgcg
ttaaacgccagtggcaaaaccattggcgtgatcagccatgtcgaggcgatgaaagagcgc
atcccggtacagataaaagtgcgtaaagttaacggccttggctacagccgactggagcgg
caattttcagtctga
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integrated database retrieval system
