Pantoea alhagi: B1H58_04015
Help
Entry
B1H58_04015 CDS
T05014
Name
(GenBank) type IV secretion protein Rhs
Organism
palh
Pantoea alhagi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
PAAR_motif
Tox-PAAR-like
Motif
Other DBs
NCBI-ProteinID:
ARJ41256
UniProt:
A0A1W6B2G7
LinkDB
All DBs
Position
complement(855463..859938)
Genome browser
AA seq
1491 aa
AA seq
DB search
MSDNNAARQGDEIIHSSVFADITSIVAEGAAYALIGAAVAAAATVAAPALGAGMAAAGVA
AVGSSCVLSGILGGVLANVAGITDDISAAADGIGNFLFPPSPAGKIITGASNVLINSLPA
ARAAGAPVAGDTPPPEPQPPGSFADYGGMLLSAAKQFGSEMWQPTVASAAAGASPLEQDK
VACDKHAGPQYLAEGSKSVFINGQPAVRAKDRTTCEATVSEKVSPDVIIGGETLTVRDIK
SGKMAGLAMTMIALSLIRGRPGKILKNMPCALAAAGGGMLADMAVNAVFASPHPVHAATG
VKVLNDENELDFSLPGRFPLRWQRSYNSLTTREGLFGAGWATAFDSWLKLEGDEVTWFDE
TGRELRFTLPAVNQAFYSISEGIIVRRNESGDVAIADDDGATWRLFKSTRANPAVLKLAS
LSDEYGNSLETGWDEHGRLVRIHDEPRAIDVTLAYEDERFPERVTAASHFDGTHHWPLMT
WRYDARGQLAAATDASGVITREYRYNDQGLMIWHRLPGGLESEYRWQKFDHWRVVENRTS
TGDGCHIAYDIPAGLTTVTQYDGETRQHYWNAQGLITRFVDERGESWRYEWDENEQLTRR
IDPLGNAVSFVYDEMGNRVQETDADGNTQTTRWLEHRALPASISAPDGATTWFYYDEHHG
LARIVDALGQSTLYRRDEYGQVTEEVDAAGNTRYQEYNEAGQIIRATDCSGRITRWRYHP
LGWSEVVITPDGEETRYRYDAAGRPVQLERAEGWLESLSWSSNGLPQAHEAADGKRSEFS
YDAAGRLIATRNALGEEVRRSWDSRGRLTALHNENGEAYRFRWGADSLLLEEAGLDGVIT
RYGYDACGRTISRTFAAGHPEAITHTFSWSAAGQLLARTTPEGQTRWHYTRSGLPERITQ
HAVLGVNAWSREAEQELTFEYDALGRVISEQGENGALNRTYDALGNRTALTLPDGRQLKH
LYYGSGHLLSIALDSLPVSDFTRDALHREVSRTQGLLTSRTAYDRLGRIQRRDVFTGHAQ
RPAPRRWSRRWDYDWRNQPVREERDDNPFNATRWQYDGSGRLLTQDGIQQEQWRWDAAGN
PLESTALPVRHNRVTQLNGICWQYDIHGRTTEKESARMRWRYRYDGEHRLTEVLCEPKDR
NKPQTQVSFRYDPLGRRISKTRRQLLNGQPQGKAVTTRFVWDGFRLLQEIHDGVPLTYVY
SDEGSYEPLARIDGVTDPEIYWFHCQPNGTPERLTDAEGELRWEAQNSAWGKLLRETPLQ
GPGFAQNLRMQGQYLDRETGLHYNLFRYYDPDSGRFTQPDPIGLAGGLNLYQYAPNALSW
IDPWGLSKCSSNGNKNKPDFYVGPAGPSATMPSTAYRYMRYLEDDGSINTWASPTIDNKA
APVTYFGFKKFNTGIEARDAFQIKGLDKVNKLDPRDKSWSDARLRGDFDTLQLYENGVPQ
VRHPRMYGDKIGAPLEPFTEAYPNYGKGGVEQVHADNRMIYFDKVNILPEE
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaacaatgcggctcgtcagggcgacgaaatcatccactccagtgtttttgct
gatatcacgagtatcgtggcggaaggtgccgcctatgcgttaatcggtgcggctgtagcc
gcggcggcaaccgttgccgcgcctgcgctgggggctggcatggcggcggcaggtgttgct
gctgtaggatccagctgcgtgctgagcggtattcttggcggcgtgctggcgaacgtggct
ggcatcaccgatgacatcagcgcggccgccgacggcatcggtaattttttgtttccacca
tcaccggcaggaaagattattaccggtgccagcaatgttttgattaacagtctgcccgcc
gcccgtgcagcaggggcaccggtggcaggtgatacgccaccgcctgaaccacagccgcct
ggcagtttcgccgactatggcggtatgctgctgtctgctgctaaacagtttggcagtgag
atgtggcaaccgaccgtcgcatcggcagctgcaggcgcttcgccgctggagcaggataaa
gtcgcctgtgataaacatgctggcccgcagtatctggcggaaggttctaaaagcgttttt
attaacggtcagcccgccgtccgtgcgaaagatcgcaccacctgtgaagccactgtctcg
gagaaggtctcgcctgatgtgattatcggtggggaaaccctgacggtacgcgatatcaag
agtggtaaaatggcaggcctggcgatgacaatgatcgccctctcattgatccgcggccgc
cccggtaaaatcctgaaaaacatgccctgcgcactggcggcagcgggcggcggcatgctg
gcagatatggctgttaatgcggtattcgcttcgccgcacccggtacatgccgcaaccggc
gtgaaggtcctgaatgacgagaacgaacttgatttctccctgccgggacgttttccgctg
cgctggcagcgcagctataacagcctgactacgcgcgaaggactatttggcgcgggctgg
gccaccgcttttgacagctggctgaagctggaaggcgatgaggtcacctggtttgatgaa
accggtcgtgagctgcgctttacgctgcctgcggttaaccaggctttttacagtatcagc
gaagggataattgtccggcgcaatgagagcggcgacgtggcgattgcagatgacgatggt
gcgacatggcgcttgttcaagtccacacgtgctaaccctgccgtgctgaagctggcctcg
ctcagtgatgaatatggcaacagtctggaaaccggctgggacgagcacggacggctggtg
cgtatccacgatgagcctcgcgccattgacgttacgctggcctatgaggatgagcgcttc
ccggaacgtgtcaccgccgccagccattttgacggaacgcatcactggccgctgatgacc
tggcgatacgacgcacgcgggcaactggccgccgccaccgatgccagtggcgtgatcacg
cgtgaatatcgttataacgatcaggggctgatgatctggcatcgcctgccgggcgggctg
gaaagtgaatatcgctggcaaaagttcgatcactggcgggtggtggaaaaccgtaccagt
accggcgacggttgccatatcgcctatgacatccccgcagggctgactaccgtcacgcag
tatgatggagagactcgtcagcactactggaacgcgcaggggctgattacccgtttcgtc
gatgagcgcggcgagagctggcgttacgagtgggatgagaacgaacagctgacgcggcgc
atcgatccgctcggcaatgccgtcagctttgtttatgacgagatgggcaaccgggtacag
gaaacggatgctgacggcaatacgcagacgactcgctggctggaacaccgggcgctaccc
gcctccatcagcgcaccggatggcgcaaccacctggttttattatgatgaacatcatgga
ctggcgcggattgtcgatgcgctggggcaaagcacgctttaccgtcgtgacgaatatggt
caggtaacggaggaggttgatgcggctggtaacacgcgttatcaggaatataacgaggcg
gggcagattatccgcgccaccgactgttccggtcgcataacgcgctggcgttaccatccg
ctcggctggtctgaagtggtgattacccctgacggcgaagagacgcgttatcgctatgat
gcagccggacgcccggtgcagcttgaacgtgcggagggctggctggagtcgctcagctgg
agcagcaacggcctgccgcaggcacatgaagctgcagacggaaaacgcagcgagttcagc
tatgacgcagccgggcgtctgattgccacccgtaatgcgctgggcgaagaggtccgccgc
agctgggacagccgcggcaggctgacggcgttgcataacgagaacggtgaagcttaccgc
tttcgctggggagcagactcgctgctgctggaagaggccgggctggatggggtgatcacc
cgttacggttatgatgcctgcgggcgcacgatttcgcgcacctttgcggccggtcatcct
gaagccattacccacactttctcctggagcgcagccggtcagctgctggcgcgcaccacc
ccggaagggcagacgcgctggcattataccaggagcgggctgccggagcgcattacgcag
catgcggtgctgggcgttaatgcctggagccgcgaagccgagcaggagctgacgtttgag
tatgatgcgctggggcgcgttatcagcgagcagggcgaaaacggcgcgctgaaccgcact
tacgatgccctgggtaaccgcaccgcgctgacgctgccggacgggcgtcagctcaagcac
ctttattacggcagcggccatctgttgagcattgcgctggacagcctgccggtcagcgac
tttacgcgtgacgcgctgcaccgcgaggtgagccggacccaggggctgctgaccagccgc
acggcgtatgaccgtctgggacgcattcagcggcgggacgtgtttaccggacatgcgcag
cgtccggctccgcgtcgctggtcacggcgctgggactatgactggcgcaaccagccggtg
cgtgaagagcgcgacgataatccgtttaatgccacccgctggcagtatgacggcagcgga
cgactgctgacgcaggatggcatacagcaggagcagtggcgctgggatgcggcgggcaac
ccgctggaaagcactgcactgccggtgcgccataaccgggtaacgcagctgaacggtatt
tgctggcagtatgacattcacgggcgcaccacggagaaagagagcgcgcggatgcgctgg
cgctaccgctacgatggcgaacaccggctgacggaagtgctgtgtgagccgaaggaccgc
aacaaaccgcagacgcaggtgagcttccgctacgatccgctgggccggcgcatcagcaaa
acgcgccgccagctgctgaacggacagccgcaggggaaagcggtgaccacgcgctttgtg
tgggacggcttccgtctgctgcaggaaattcatgacggggtgccgctgacgtatgtctac
agcgatgagggaagttacgagccgctggcgcgcattgatggcgtgacggacccggagatt
tactggttccactgccagccgaacggcacgccggagcggctgacggatgcggaaggggag
ctgcgctgggaagcacagaacagcgcctgggggaagctgctgcgggaaacgccgctgcag
ggaccgggattcgcacagaacctgcggatgcaggggcagtatcttgaccgtgagacgggc
ctgcactataacctgttcaggtactacgacccggacagcggccggtttacccagcccgac
ccgataggactggcgggcgggctgaacctgtatcagtatgcgccgaatgcgttaagctgg
attgacccttgggggttgagtaagtgcagcagtaatggaaacaagaacaaaccagacttc
tatgtaggacctgcggggccaagtgcgacgatgccttccactgcttatcggtacatgagg
tatcttgaagacgatggtagtattaatacttgggcttcacctactattgataataaagca
gcaccagtaacttattttggttttaagaaattcaatacaggcatcgaggcgagagatgca
tttcaaatcaaagggttagataaggttaataaattagatcccagagataaatcatggagt
gatgcccgcctacgcggtgattttgatacattacagctttatgaaaacggagttccacaa
gtaaggcaccccagaatgtacggtgataaaattggtgcgccgttagaaccatttaccgag
gcttacccgaattatggaaaaggaggagtggagcaagtacatgcagataatagaatgatc
tattttgacaaagtaaatattttgccggaggagtaa
DBGET
integrated database retrieval system
