Pantoea alhagi: B1H58_08675
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Entry
B1H58_08675 CDS
T05014
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
palh
Pantoea alhagi
Pathway
palh03420
Nucleotide excision repair
palh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
palh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B1H58_08675
03430 Mismatch repair
B1H58_08675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palh03400
]
B1H58_08675
Enzymes [BR:
palh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B1H58_08675
DNA repair and recombination proteins [BR:
palh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B1H58_08675
MMR (mismatch excision repair)
Other MMR factors
B1H58_08675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
PhoH
AAA_22
DUF6658
Motif
Other DBs
NCBI-ProteinID:
ARJ42092
UniProt:
A0A1W6B4S1
LinkDB
All DBs
Position
1834632..1836794
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AA seq
720 aa
AA seq
DB search
MDVSDLLNSLNDKQREAVAAPRNNLLVLAGAGSGKTRVLVHRIAWLLTVENCSPYSIMAV
TFTNKAAAEMRHRIEQLIGTSQGGMWIGTFHGLAHRLLRAHHLDARLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGKKDEGLRPQNIESYGNPVEQTWLRIYQAYQES
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNIMVDEFQDTNNIQYAWIRMLAGDS
SRVMIVGDDDQSIYGWRGAQVENIQRFLNDFRGAETIRLEQNYRSTNNILKAANALIANN
HGRLGKELWTDGSDGEPISLYCAFNELDEARFVVNRIKVWQENGGALSDCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQASRDRQLTLWQASRELLQEKALAGRAASALQRFTELVDSLAQETAELPLHIQ
TDRVIKDSGLWLMYEQEKGEKGQARIENLEELVNATRQYSYQDEDEDLMPLQAFLSHAAL
EAGEGQADKWQDAAQLMTMHAAKGLEFSQVFIVGMEEGMFPSQMALDEGGRLEEERRLAY
VGVTRAMKKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVDEVRLRASISRPVNHQRMG
TPVAQNDSGFTLGQRVRHAKFGEGTIINLEGSGDHSRLQVAFQGQGIKWLVAAYARLEAV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgacctgctaaacagcctgaatgataaacagcgcgaagccgtggcggct
ccacgcaataacctgctggtgctggcaggcgcgggcagtggcaagacacgcgtgctggtg
catcgtatcgcctggctactgacggtagagaactgctcgccctactcgattatggcggtg
acctttaccaataaagccgccgcagagatgcgtcatcgtattgagcagctgatcggcacc
agtcagggcggcatgtggatcggcacgttccacggtctggcgcatcgcctgttgcgcgcc
catcaccttgacgctcgcctgccgcaggactttcaaattctcgacagcgaagatcagctg
cgcctgctgaagcggctgatcaaggcaatgaatctggatgaaaaacagtggccgccgcgt
caggcaatgtggtacatcaacggcaaaaaagatgagggtttgcgtcctcagaatattgaa
agctacggcaatccggtggagcaaacctggctgcgcatttatcaggcctatcaggaatcg
tgcgatcgtgccgggctggttgattttgccgagctgctgctgcgcgcccatgagctgtgg
ctgaataagccgcacattcttaaccactatcgtgaacgcttcaccaacatcatggtggat
gaattccaggataccaacaatatccagtacgcctggattcggatgctggctggcgacagc
agccgggtgatgatcgttggcgatgacgatcagtccatttatggatggcgcggcgcgcag
gtggaaaacattcagcgtttcctgaacgattttcgcggcgcagaaaccatccgtctggag
caaaactatcgctccaccaataatatcctgaaggccgccaacgccctgattgccaacaac
catggccgactgggaaaagagctgtggaccgacggcagcgacggtgaaccgatctcgctc
tattgcgcttttaacgagctggatgaagcgcgctttgtggtgaaccgtatcaaagtgtgg
caggagaacggcggcgcgctcagcgattgtgcgattctttatcgcagcaacgcccagtcg
cgtgtgctggaagaggcgctgctgcaggccagtatgccgtatcgtatttacggcggcatg
cgcttctttgagcgtcaggagatcaaagatgcgctggcctacctgcgcctgatcgccaac
cgtaacgatgatgccgcctttgagcgtgtggtgaatacgccaacgcgtggcattggcgat
cgcacgctggacgtggtgcgtcaggcgtcgcgtgaccgtcagctaacgttatggcaggcg
agccgcgagttgctgcaggaaaaggcgctggccggccgcgccgcttcggcgctgcagcgt
tttaccgaactggtggattcgctggcgcaggaaacggcggagctgcctctgcatattcaa
accgaccgggtgatcaaagattccggcctgtggctgatgtatgagcaggaaaaaggcgag
aagggccaggcgcgcatcgaaaacttagaagagctggtgaacgctacgcgtcagtacagc
tatcaggacgaagatgaagatttgatgccgttgcaggcgtttctgtcgcacgcggcgctg
gaagcgggcgaaggtcaggctgataaatggcaggatgcggcccagctgatgactatgcat
gccgccaaggggctggagttcagccaggtctttattgtcgggatggaagaggggatgttc
cccagccagatggcgctcgacgagggcggcaggctggaagaggagcgccgtctcgcctac
gttggcgttacccgcgcaatgaaaaagctgacgttaacctatgcggaaacgcgtcggctc
tacgggaaggaagtttatcatcgcccgtcgcgctttatcggtgaactgccggaagagtgt
gtggatgaggtacgcctgcgcgccagcattagccgcccggtcaaccatcagcggatgggc
acacccgtggcgcagaatgacagcggctttacgctggggcagcgcgtgcgccatgccaag
tttggcgaaggcaccatcatcaaccttgaaggcagcggcgatcacagccgtctgcaggtc
gcatttcagggacagggcattaaatggctggtggccgcctatgcacggcttgaagcggta
tag
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