Pantoea alhagi: B1H58_11335
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Entry
B1H58_11335 CDS
T05014
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
palh
Pantoea alhagi
Pathway
palh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B1H58_11335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palh03400
]
B1H58_11335
Enzymes [BR:
palh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B1H58_11335
DNA repair and recombination proteins [BR:
palh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B1H58_11335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ARJ42560
UniProt:
A0A1W6B635
LinkDB
All DBs
Position
2411669..2415058
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AA seq
1129 aa
AA seq
DB search
MFTVYHSNQLDILKSLAAYLIENEPLRDPFQSEVVLVQSPGMAQWLQMQLAQQFGIAANI
AFPLPASFIWDMFVRVLPGIPKESAFNKASMSWKLMTLLPDLLRQEAFRPLQHYLNDDDD
KRKLFQLASRVADLYDQYLVYRPEWLNSWQQGKMIDGLGEAQQWQAPLWAALVEYTRDLD
QPEWHRANLYARFIQKLESSESRPAGLPDRVFICGISALPPVYLQALQALGKHIDIHLLF
TNPCRHYWGDIQDYAFLAKLQSRHRRHHQQQQEIALFRDPDAASSLFNDAGEQQLTNPLL
ASWGKLGRDNLYLLAQMEAREIDAFVDVPEDTLLQALQHDLLELEDNAVIGLDAEELKSS
HKKRCLDPQDRSVVVHVCHSPQREVEVLQDQLLAMMEADPSLTARDIIVMVADIDAYTPY
IQAVFGNASSDRYLPFAISDRRASFAHPAIMAFLNLLALPESRFACEEVLALLEVPALAT
RFAIDEEGLRRLRMWVEESGIRWGLDDDNVRELKLPPTGQHTWRFGITRMLLGYAMESMH
GDWDGILPYDESSGLIAELAGNLAELLMQLNHWRQVLAQPRTLSDWQPLCREMLQTFFAA
DVNTDAALMLIEEQWQQVMAYGLQARYVDSVPATLLRDELASRLDQQRISQRFLAGPVNF
CTLMPMRSVPFRVVCLLGMNDGVYPRTLPPLGFDLMAQQPQKGDRSRRDDDRFLFLEALL
SAQQKLYISYIGRSIQDNTERYPSVLVTELVDYIGQSFHLPGDEALDVDSSAQRVLAHLH
CLHSRMPFDPQNFAPQAEYRSFAQEWLPAARGSGEPHPPFMQPLPPLEIHELSFEQLLRF
WRHPVRAFFTMRLGVSFALEQTELPDAEPFVLDALDRYQINAQLLNALIEEEDTQRLFNH
HRAAGVLPYGAFGELFWQTQQEEMMPLAEQVRALRAESRSMEIDLTIAGVKLNGWLPQVQ
DSGLLRWRPGVLNFTDGLALWLEHLAWCALGGKGQSRMLGRKESSWCFDAIDAQQAQEWL
TRYVEGYRDGMCSPLLLLAKTGGAWLEASYDAKNDIMLMDEATQTKARAKLLTAWQGNYQ
MEGEGSDPYLQRLFRTLEAAQLDAICSAAEQWLLPLLRFNRSDTQKNDE
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgtttacggtttatcactccaaccagctcgatattcttaaatcgctggcggcgtatctg
attgaaaacgaaccgttacgcgacccttttcagtccgaggtggtgctggtgcaaagcccg
ggcatggcgcagtggctacagatgcagctggcacagcagttcgggattgcagccaatatc
gcttttccgctgcccgcctcttttatctgggatatgtttgtgcgcgtcttgcccggcatc
cccaaagagagcgcctttaataaagccagcatgagctggaagctaatgacgctgctgccc
gatctgctgcggcaggaggcgtttcgcccgttgcagcactatctcaacgacgacgatgac
aaacgtaagctgttccagctggcttcgcgcgtggccgatctttatgaccagtatctggtc
tatcgcccggaatggctgaacagttggcagcaggggaaaatgatcgatgggctgggcgag
gcgcagcagtggcaggccccgctgtgggctgcgctggtggaatatacccgcgatctcgat
cagccagagtggcaccgcgccaacctgtatgcgcgttttattcaaaagctggaaagcagc
gaatcacgtccggcgggcttgcccgaccgcgtctttatctgtgggatctccgcgctgccg
cctgtctatctgcaggcgctacaggcgctgggcaagcatatcgatattcatctgctgttt
accaatccctgtcggcactactggggcgatatccaggattacgcgtttctggcgaaactt
caaagccgccaccgtcgccatcatcagcagcagcaggaaattgccctgtttcgcgatccc
gacgcagcctcttcattatttaacgatgccggggagcaacagctgaccaacccgctgctg
gcctcgtggggtaaactggggcgcgataacctctatctgctggcgcaaatggaggcgcgg
gaaatcgatgcttttgtcgatgtcccggaggatacgctgttgcaggcgttgcagcacgat
ctgctggagctggaagataatgcggtgatcgggctggatgcagaagagctgaaaagcagc
cataaaaagcgctgcctcgatccccaggatcgatccgtggtggtacatgtctgtcacagc
ccgcagcgtgaagtggaagttttgcaggatcaattattggccatgatggaggcggatccc
tcgctaaccgctcgcgatattatcgtgatggtggccgatattgatgcctatacgccatat
attcaggcggtattcggcaacgcatcttcagatcgctatctgccttttgccatttcggat
cgccgcgccagcttcgcccatccggcgattatggcctttcttaacctgctcgctttgccg
gaaagccgcttcgcctgtgaagaggtgctggcgctgctggaggtaccggcactggcaacg
cgctttgctattgatgaggaagggctgcgccggttgcgtatgtgggtcgaggaatccggt
attcgctgggggctggatgatgataacgtgcgtgagctgaagctaccgcccaccggtcag
catacctggcgttttggcatcacgcgtatgttgctcggttatgccatggaaagcatgcat
ggcgactgggacggcatcctgccttacgatgaatccagcggattaatcgccgagctggcc
ggtaatctggcagaactgctgatgcagcttaaccactggcgtcaggtactggctcagccg
cgtacgctgagcgactggcaaccgctgtgccgcgaaatgctgcaaaccttttttgctgcc
gatgtgaataccgatgctgcgctgatgctaattgaagagcagtggcagcaggtgatggcc
tatggtctgcaggcgcgctacgttgatagcgttccggctacgctgctacgcgatgagctg
gcctcacgcctcgatcagcagcgcatcagccagcgtttcctggccgggccggttaacttt
tgtaccctgatgccgatgcgttcggtgccgtttcgcgtggtatgtctgctgggcatgaat
gacggcgtctatccgcgtacgctgccgccgctggggtttgatttaatggcgcagcagccg
caaaagggcgaccgcagccgccgcgacgatgaccgcttcctgttcctggaggctttgctt
tcagcccagcagaaactctatatcagctatattggccgctcgattcaggataatacggaa
cgatatccttcggtgctggtcactgaactggtggactatattgggcaaagttttcatctg
ccgggcgacgaggcactggatgttgacagcagcgctcaacgggtactggcgcatctgcac
tgtctgcacagccgtatgccgttcgatccgcaaaacttcgcgccgcaggcggagtatcgc
agtttcgcccaggagtggctgcctgctgcgcgtggcagcggcgagccacatccaccattt
atgcagccgctgccgccgctggagatccatgagctgagttttgaacagctgctgcgtttc
tggcggcatccggttcgcgccttctttaccatgcgcctcggcgtcagttttgcgctggag
cagaccgaactgccagatgccgaaccctttgtactggatgcgctcgatcgctatcagatc
aacgcccagctgctaaacgcgctgattgaagaggaagatacccaacgactgttcaatcat
catcgtgcggcgggcgtattgccatatggcgctttcggtgaactcttctggcagacgcag
caggaagagatgatgccgctcgctgaacaggtcagggcgttgcgcgctgaaagtcgcagt
atggaaatcgacctgaccattgccggcgtcaaacttaacggctggttgccgcaggtgcag
gatagtggcctgctgcgttggcgacctggcgtgttgaactttaccgatgggctggcgctg
tggctggagcatctggcgtggtgcgcgttgggtggaaaagggcagagccgtatgctgggg
cgcaaagagagcagctggtgctttgacgcgatcgatgcgcagcaggcgcaggagtggctt
acgcgctatgtcgaaggctatcgtgacggcatgtgttcaccgttgctgctgctggcgaaa
accggtggtgcctggctggaagcgagctatgacgctaaaaacgacatcatgctaatggat
gaggccacgcaaaccaaagcgcgggcgaagctgttaaccgcctggcagggcaactatcaa
atggaaggcgaggggagcgatccctatctgcaacggctgttccgcacgctggaagcggcg
cagcttgatgccatttgctctgcagccgaacagtggctgttgccgctgctgcgttttaac
cgcagcgatacgcagaaaaatgatgagtag
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