Pantoea alhagi: B1H58_11345
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Entry
B1H58_11345 CDS
T05014
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
palh
Pantoea alhagi
Pathway
palh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B1H58_11345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palh03400
]
B1H58_11345
Enzymes [BR:
palh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B1H58_11345
DNA repair and recombination proteins [BR:
palh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B1H58_11345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DUF6259
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ARJ42562
UniProt:
A0A1W6B652
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All DBs
Position
2418065..2421607
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AA seq
1180 aa
AA seq
DB search
MSDNNPQRLDPLTLPLRGERLIEASAGTGKTFTIGILYLRLLLGLGQDNAFHRPLSVEEI
LVVTFTEAATAELRGRIRQNIHELRLACVRGSSANPMLAALMQEISDPADAAALLLAAER
QMDEAAIFTIHGFCQRMLNLNAFESGMLFEQQLIEDESALRRQAAADFWRRHCYPLPLTI
AKVIAQEWTGPEQLLATLTPWLHGESPALKYAPDSEETLAQRHEKIVARIDNLKAQWRAA
AADLRDLIEKSGVDKRSYSSKHLPAWLNNVAAWVEEETQGYTVPKDLARFRQSVLLGKTK
KGEPPRHPLFTAVDDFFAEPLSLRDLIIARALEDIRLATRREKKLRALLGFDDLLSRLDE
ALQQPGGDLLAEAIRARYPVALIDEFQDTDPQQYRIFRRLYIAQPENALLLIGDPKQAIY
AFRGADIFTYMRARSEISAHYTLDTNWRSSPAMVASVNQLFSRLDNPFLFSQIPFIEVNA
APSNETRGFHLDGAVQPALRFWLQPGDGVGVSEYQQWMARQCAAEILHWLQAGLRGEALV
GKQGDQRAVRASDITVLVRSRSEAAVIRDALESLNIPSVYLSNRDSVFTTPEARELLWLL
QAVLAPELERTLRSALATSILGLDAATIDAMSQDEDRWDALVEEFAAYRQRWQQRGVLPM
LRELMTRRSIAENLLASESGERRLTDLLHLGELLQEAAAQLDSEHALVRWLAQQVAQPNH
QSASQQLRLESDRHLVQIVTIHKSKGLEYPLVWLPFAANFREAAQGLYHDRQTFQALLDL
SDDEESLALAEQERLAEDLRLLYVALTRSVYHCSIGIAPLIKGNRKKEGDSDLHKSAVGY
LVQRGEALNASGLQEALYGLSNDAIEIVMPEEATEGRWQPEGDSMPELDSPVISRPLQDH
WRVTSYSGLQQHGPTVALDLAPRFDVDAAGETTDVVAPALTPHTFPRGASPGTFLHGLFE
TLDFNQPPDETWLAEQLQLAGFGEQWLPMLSDWISRVLQTPLNQDGIHLAGLTPGRYLVE
LEFYLPMHQLLTAPALDAVMRQHDTLSARAPELNFQQVQGMLKGFIDLVFCWQGKYYLLD
YKSNWLGEESAAYTPQAMAEAMISHRYDLQYQLYTLALHRYLRHRVADYDYQRHFGGVFY
LFLRGMDGSASENGVFHYRPSADFVMALDRLFTGDKVEAE
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaacaatccccagcggctcgatccgctaacactgccgctccgtggtgagcgg
cttatcgaggcgtcagcgggaaccgggaaaacctttactatcggcatactctacctgagg
ctgttgcttggcctcgggcaggataatgcttttcatcgtccgctgtcggtggaagagatt
ctggtggtgacctttaccgaggcggccaccgctgaactgcggggacgtattcggcagaat
atccatgagctgcggctggcctgcgtgcgtggcagcagtgccaatccgatgctggcagcg
ctgatgcaggagattagcgatcctgctgatgccgccgcgctgctgctggctgccgaacgg
caaatggatgaagcggcaatttttaccatccacggattttgtcagcggatgctaaacctc
aacgcttttgaatccgggatgctgtttgagcagcagctgattgaagatgaatctgcgctg
cgccgtcaggccgctgccgacttctggcgtcgccactgttatcctctgccgctgacgatt
gccaaagtcattgcgcaggagtggaccggtccggaacagctgctcgccaccttaacgccg
tggctgcatggcgaatcgccagcgttaaaatatgcgccggatagtgaagaaacgctggcg
cagcgccatgagaaaatcgtggcgcgcattgataacctgaaggcgcaatggcgtgcggca
gcagcagatttgcgcgatctgattgaaaaatctggcgttgataagcggagttacagcagt
aagcatttaccagcctggctgaataatgtggcagcctgggtggaagaagagactcagggt
tatacggtgcctaaagatctggcacgttttcgccagagcgtgctgctggggaaaaccaaa
aagggcgagccgccacgccatccgctgtttacggcggtggatgacttctttgccgagccg
ctttcgctacgcgatctgattattgcccgggcgctggaagatattcgcctggcaacccgc
agagagaaaaagctacgggcgctgctcggctttgatgatttgctgagtcgtctggatgaa
gcactgcagcagcccggcggcgatctgctggcggaagccattcgtgcccgctatccggtt
gcgttgatcgatgaattccaggataccgacccgcagcagtatcgtattttccggcggctt
tatatcgctcagccggaaaatgcgctgctgctgataggcgatcccaagcaggcgatttac
gcctttcgcggcgcggacatttttacctatatgcgtgcccgtagcgaaatcagcgcgcac
tatacgctggatactaactggcgttcatcgccagcgatggtcgccagcgtcaaccagctt
ttttcccggctggataatccgtttttattcagtcagatcccttttattgaggtgaacgcc
gcgccgtccaatgaaacgcgcggtttccatcttgacggcgcggtgcagccagcgctgcgc
ttttggctgcagcccggcgacggtgtgggcgttagcgagtaccagcagtggatggcgcgt
cagtgcgcggcggaaatcctccactggctgcaggctggcctgcggggtgaggcgctggtg
ggcaagcagggcgaccagcgtgcggtcagagcctccgacattaccgttctggtgcgcagc
cgcagcgaggctgcggtgatacgcgatgcgctggaaagtcttaatatcccttcggtctat
ttatctaaccgcgacagcgtgtttactacgccggaagcgcgtgagctgctgtggctgctg
caggcggtgctggcaccggagctggagcgtaccctgcgcagcgcgctggccaccagtatc
ctggggctggacgccgccaccatcgacgccatgagtcaggatgaagatcgttgggacgcg
ctggttgaagagtttgcggcctatcgtcaacgctggcagcagcgcggcgtgctgcctatg
ctgcgtgaattaatgacccggcgcagcattgcagaaaatctgctggcctcagaaagcggc
gaacggcgtctgaccgatctgctgcaccttggggaactgttacaggaggccgccgcgcag
ctggatagcgaacatgcgctggtgcgctggctggcacagcaggtcgcgcagcctaaccat
cagtccgccagtcagcagctgcgtctcgaaagcgaccgtcatctggtgcagattgtgact
attcacaaatccaaagggctggagtatccgctggtctggctgccgtttgccgctaacttt
cgcgaggcggcgcaggggctatatcacgatcgacagacttttcaggcgttgctggatttg
agcgatgatgaagagagcctggcgctggccgagcaggaaaggctggcggaagatttgcgc
ctgctctatgtggcgctgacccgctctgtttatcactgtagcatcggcattgcgccgctg
attaagggcaaccgtaaaaaagaaggtgacagcgatctgcacaaaagcgcggtgggctat
ctggttcagcgtggtgaagcactaaacgccagcggattacaggaagcgctgtatggccta
agcaacgacgcgatagagatagtgatgccggaagaggctacggaagggcgctggcagccg
gaaggcgatagcatgccggagctggacagcccggtgatttcccgaccgctgcaggatcac
tggcgcgttaccagctactccggtctgcaacagcatggcccgacggttgcgctcgatctg
gcgccgcgttttgatgtcgatgcggcaggagaaaccacagacgttgttgcgccagcacta
acgccgcatacctttccgcgcggcgcttcgccgggtacttttctgcatggcctgtttgaa
acgctggattttaaccagcctccggatgagacatggctggcggagcagctacagctggct
ggctttggcgaacaatggttgccgatgctgtccgactggattagccgggtattgcaaacg
ccgcttaatcaggacggcattcatctggcgggattaacgccgggccgctatctggtcgag
ctggagttttatctgccgatgcatcagctgctaactgcgccagcgctggatgcggtaatg
cgtcagcacgatacgttgtcggcacgcgcgccggagctgaattttcagcaggtgcagggg
atgctgaaaggctttatcgatttggtcttttgctggcagggaaaatattacctgctggat
tataaatctaactggctgggcgaagagagtgccgcctatacgccgcaggcgatggcggaa
gcgatgattagtcaccgctacgatttgcagtatcagctttatacgctggcgctgcatcgc
tatttgcgccatcgtgtagcggattacgattatcagcgccacttcggcggtgtgttttac
ctttttttgcgcggaatggacggcagcgccagtgaaaacggcgtgtttcattaccgtccg
tctgcagattttgtcatggcgctggatcgcctgtttaccggagacaaggtggaagcggaa
tga
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