Pantoea alhagi: B1H58_12270
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Entry
B1H58_12270 CDS
T05014
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
palh
Pantoea alhagi
Brite
KEGG Orthology (KO) [BR:
palh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
palh03009
]
B1H58_12270
Enzymes [BR:
palh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B1H58_12270
Ribosome biogenesis [BR:
palh03009
]
Prokaryotic type
rRNA helicases
B1H58_12270
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ARJ42721
UniProt:
A0A1W6B6L0
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All DBs
Position
complement(2600548..2601891)
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AA seq
447 aa
AA seq
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MTATTFSELELDESLLDALQDKGFSRPTAIQAEAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRVLILTPTRELAMQVADQAQELAKHTQLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVEILILDEADRMLDMGFAQDIETIAAETRW
RKQTMLFSATLEGDGIKDFAERLLKEPVEIDSDPSRRERKKIQQWYYRADDVAHKTKLLV
HLLKQPEATRSIVFVRKRERVHELVGWLREAGIQTSYLEGEMVQAKRNEALKRLMDGRVN
VLVATDVAARGIDVDDVSHVFNFDLPRTADVYLHRIGRTGRAGRKGTALSLVEAHDYLLL
EKISRYISEPLKARTIDELRPATRAPSQKLKGKPSKKVLAKRKEKEKKKEEENKPRVKVR
HRDRKNIGKRRKPAAANGSDTNKDGAE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaaccacattctccgaactcgaacttgacgaaagcctgctggatgccctgcag
gacaaaggcttttcccgccctaccgctattcaggcagaagcgattccccctgcgctggat
ggtcgcgacgtgttgggttcagcaccaaccgggaccgggaaaacggcggcttatcttttg
cctgcgctgcaacatctgctggatttcccgcgtaaaaaatctggtccgccacgggtatta
atcctgacgccgacgcgcgaactggcgatgcaggttgccgatcaggcgcaggagctggct
aagcatactcagctggacatcgccaccattaccggcggcgtggcctatatgaaccacgct
gaagtgttcagcgaaaaccaggatatcgtggtagccaccacgggacgcctgctgcaatac
atcaaagaagaaaacttcgactgtcgggcagtagagatcctgatcctcgacgaagcggac
cgcatgctggacatgggttttgcgcaggacatcgagactatcgcggcggaaacgcgctgg
cgcaagcaaaccatgctcttttctgccacgctggaaggcgacggcattaaagattttgcc
gaacgtctgcttaaagagccggtggaaatcgattccgatccttcacgtcgtgaacgtaaa
aagatccaacaatggtattaccgcgcagatgatgtcgcccataagaccaaattgctggta
catctgctgaaacagccggaagccacccgctctatcgtctttgtgcgtaagcgcgagcgt
gtgcatgaactggtcggctggctgcgtgaagccggtattcagaccagctatctggaaggc
gagatggtgcaggcaaagcgtaacgaagcgctgaagcgtctgatggatggtcgggttaat
gtgctggtggccaccgatgtggccgcacgcggcatcgatgtggatgatgtcagccatgtg
tttaacttcgatctgcctcgcacggcggatgtctatttgcaccgtattggtcgcaccggt
cgcgcgggtcgtaaaggtacggcgctgtcgctggtcgaagcgcacgattatctgctgctg
gagaaaatcagccgctacatcagtgagccgctgaaagcgcgcactattgatgagctgcgc
cccgctacgcgcgcgcccagccagaaattaaaaggcaagccgtcgaagaaagtactggcg
aagcgtaaagagaaagagaagaaaaaagaagaagagaacaagccacgcgttaaagtacgt
caccgcgaccgcaaaaatatcggtaagcgacgcaaacctgccgccgctaacggtagcgat
acgaataaagatggtgctgaataa
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