Pantoea alhagi: B1H58_14700
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Entry
B1H58_14700 CDS
T05014
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
palh
Pantoea alhagi
Pathway
palh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
palh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
B1H58_14700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palh03400
]
B1H58_14700
Enzymes [BR:
palh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
B1H58_14700
DNA repair and recombination proteins [BR:
palh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
B1H58_14700
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B1H58_14700
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B1H58_14700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ARJ43158
UniProt:
A0A1W6B7S2
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All DBs
Position
complement(3142006..3143433)
Genome browser
AA seq
475 aa
AA seq
DB search
MTDKQNQPTFLFHDYETFGKSPALDRPAQFAGIRTDMDFNIIGEPEVFYCQPADDYLPQP
EAVMITGITPQLAQARGVKEAEFARRIHDLFTVENTCVVGYNNVRFDDEVTRNLFYRNFY
DPYAWSWQNGNSRWDLLDVMRACYALRPEGIVWPENEDGLPSFKLEQLTQANGVEHTQAH
DAMSDVYATIAMAKLVKTKQPKLFDFLFSHRTKQKINTLIDIPQMKPLMHISGMFGALRG
NTSWIAPLAWHPENRNALIVCDLAGDITPLLELDADALRERLYTPRQQLGDDAAVPIKLV
HINKCPVLAPANTLRPEDAGRLGIDRQHCLNNLAVLRQHAEIREKVVALYAEAEPFIPSP
DVDAQLYNGFFSDADKAAMNIIQQTAPANLPALDLTFNDARIAPLLFRYRARNFPGTLDD
SEQQRWLQHRREALNSERIESFLLELESLANLYDGDSEKLTQLKALYDYARELVS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtgacagacaaacaaaaccagccgacctttctcttccacgactatgaaaccttcggtaaa
agcccggcgctggatcgaccggcgcagtttgccgggatccgcaccgatatggattttaat
atcatcggtgaaccagaagtgttttattgccagcccgccgacgactatcttccgcagccg
gaagcagtgatgatcaccgggattacgccacagctggcgcaggcgcgtggcgttaaggaa
gcggagttcgcacggcgtattcatgacctgttcaccgttgagaacacctgcgtggtgggc
tacaacaatgtgcgcttcgatgatgaagtgacgcgcaatctcttctatcgtaacttctac
gatccctatgcctggagctggcaaaacggcaattcgcgctgggatctgctggatgtgatg
cgtgcctgctatgcgctgcgtccggaaggtattgtctggccagaaaatgaggatggatta
ccgagctttaaactggagcagctaacgcaggccaacggcgtggaacatactcaggcgcac
gatgcgatgtcagatgtttatgccaccattgccatggcgaagctggtgaaaaccaaacag
ccgaagctgtttgatttcctcttcagccaccgcacaaagcagaaaatcaatacgctgatt
gatattccgcagatgaagccgctgatgcatatctctggcatgttcggtgcactgcgcggg
aataccagctggattgcgccgctggcctggcacccggaaaatcgcaatgccctgatcgtt
tgcgatctggcgggtgatatcacgccgctgctggagctggatgccgacgcgctacgcgaa
cgcctttacactccccgtcagcagctgggtgatgatgccgcggtaccgattaaactggtg
catatcaataaatgtccggtgctggcccctgctaacacgctgcgtccggaagatgccggg
cggcttggcatcgatcgccagcactgcctgaataatctggcggtgctgcgccagcatgca
gagatccgtgaaaaagtggttgccctgtatgccgaagcggagccttttatcccttcgccg
gatgttgatgcccagctctataacggctttttcagcgatgccgacaaagcggcaatgaac
attattcagcagacggcacccgccaatctgccggcgctcgatctgacctttaacgatgca
cgcatcgccccgctgctgtttcgctatcgtgcgcgtaatttcccgggcacgctcgatgac
agcgagcagcagcgctggctgcagcaccgccgcgaagccttaaacagcgaacgcattgaa
tctttcctgctggagctggagtcgctggctaatctgtacgacggcgatagtgaaaagtta
acgcaactcaaggcgctgtatgactacgcgcgtgaactggtctcataa
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