Psychrobacter alimentarius: A3K91_0094
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Entry
A3K91_0094 CDS
T04320
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pali
Psychrobacter alimentarius
Pathway
pali03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pali00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A3K91_0094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pali03019
]
A3K91_0094
03016 Transfer RNA biogenesis [BR:
pali03016
]
A3K91_0094
Enzymes [BR:
pali01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A3K91_0094
Messenger RNA biogenesis [BR:
pali03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A3K91_0094
Transfer RNA biogenesis [BR:
pali03016
]
Prokaryotic type
tRNA degradation factors
A3K91_0094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
AMT95731
UniProt:
A0A144N307
LinkDB
All DBs
Position
103951..106053
Genome browser
AA seq
700 aa
AA seq
DB search
MTMFNTIKREFQYGNQQVVIETGRVARQANSILVHMGGVTVLVAAVVKSEAKEGQNFFPL
TVNYQEKMYAAGKIPGAYGKREGRASEFETLTSRLIDRPIRPLFPEGYVNEIQITATVVS
SDKTQSADIAALIGASAALAISDAPFNGPVAAARVGFINGEYVLNPTLEELKESDLDLVV
AGTKSAVLMVESEAAELSEDQMLGAVLYGHEQQQIVIDNIASMAEEVGTAKQQYSAPERD
KALETSMKEQFGEQVADAYTITDKQERYTKLDDIKQSVIDALAGDAESENYAETVSELKE
IYNDLKYRTVRDNILSGKPRIDGRDLETVRALDVQVGVLPYTHGSALFTRGETQALVTTT
LGNSRDVNMIDSLGGTIRDHFMLHYNFPHFSVGETGREGIPKRREIGHGRLARRGVEAML
PDSERFPYVIRVVSEITESNGSSSMASVCGASLALMDAGVPLKAPVAGIAMGLVKEGERF
AVLSDILGDEDHLGDMDFKVAGSKNGITALQMDIKIEGITPDIMEQALKQAHAGRIHILD
AMNKVLPESRTEINAHAPNYAVIEINPDKIRDVIGKGGAMIRQLTEETGAVIDIDDGGTI
RIFGENKAATKAAIGRIEALTAEVEVGKTYEGTVARIVDFGAFVNVLPNTDGLVHISQIA
EERVENVSDYLKEGQVVKVFVQDVDNRGRIKLTMKGIEQN
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgtttaataccattaagcgtgaattccagtatggcaaccagcaggttgttatc
gaaactggtcgagttgcacgtcaggccaattctattttggtacacatgggcggtgttacg
gtactagtcgcagcggttgtaaaatcagaagccaaagaaggacaaaacttctttccactt
accgtaaactatcaagaaaaaatgtatgcggcaggtaaaatcccaggtgcttatggcaaa
cgtgaaggccgtgctagcgaatttgaaacgctaacctcacgcttgattgatcgtccgatt
cgtccactatttccagaaggttatgtaaacgaaatccagattacagctaccgttgtatca
tcagataaaactcagtctgcagatatcgctgcattgattggtgcttcagcggcgttggct
atctctgatgcgccattcaacggccctgttgctgctgcgcgtgttggtttcatcaatggt
gaatacgttcttaacccaacacttgaagagcttaaagaaagtgatcttgacttggttgtc
gctggtaccaaatctgcggtattgatggttgaatctgaagcggcagagctgtctgaagat
cagatgttaggcgctgtattgtacggtcatgagcagcagcaaatcgtcattgacaatatt
gcctcaatggcagaagaagtgggtacggctaagcagcagtattctgcgcctgagcgtgat
aaagccttagaaaccagcatgaaagagcagtttggcgagcaagtagctgacgcttatacc
atcacggataagcaagagcgctataccaaacttgacgacattaagcagtcagttattgat
gcgcttgctggtgatgctgaatcagaaaactatgctgagaccgtatctgagttaaaagaa
atctataacgaccttaaatatcgtacggttcgtgacaatatcttgtcaggtaagccacgt
atcgatggccgtgatcttgaaaccgttcgtgcgcttgatgtacaagttggtgtactccct
tatacgcatggttcagcactatttactcgcggtgagacgcaagcattggttacgaccacg
cttggtaacagccgtgacgttaacatgattgattcactaggtggtacgattcgtgatcat
ttcatgttgcattataacttcccacatttctctgttggtgagacaggtcgtgaaggtatt
ccaaaacgtcgtgaaatcggtcatggtcgtctagcgcgccgcggtgtagaagcgatgcta
ccagatagcgaacgcttcccatatgttattcgtgtggtgtcagagattactgaatcaaac
ggttcatcttctatggcttctgtttgtggcgcaagtttggcattgatggatgcgggtgta
ccattaaaagcccctgttgctggtatcgcaatgggtctggttaaagaaggcgaacgtttt
gctgtcttatcagatatcttaggtgatgaagatcatcttggcgatatggattttaaagtg
gcagggtctaaaaatggtatcactgcgctacagatggatatcaagattgaaggcatcacg
cctgatatcatggaacaggcgcttaaacaagcccatgctggtcgtattcatatcttggac
gccatgaacaaagtattgccagaaagccgtactgaaatcaatgctcatgcgcctaactat
gctgttatcgaaatcaacccagataagattcgtgacgtcatcggtaaaggcggcgcaatg
attcgtcagctaactgaagagaccggtgcggttatcgacatcgatgacggtggcacgatt
cgtatctttggtgaaaacaaagcagcaaccaaagcggctatcggtagaatcgaagcattg
acggctgaagttgaagttggcaaaacgtatgaaggtacggttgctcgtatcgtcgacttt
ggtgcttttgtgaatgttctaccaaatacagatggtttggttcatatctcacaaatcgca
gaagagcgcgtagagaatgtatcagactacctaaaagaaggtcaggttgttaaagtcttt
gtacaagacgttgataatcgtggtcgtatcaagttaacgatgaaaggtatcgagcaaaac
taa
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