Psychrobacter alimentarius: A3K91_0262
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Entry
A3K91_0262 CDS
T04320
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pali
Psychrobacter alimentarius
Brite
KEGG Orthology (KO) [BR:
pali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pali03021
]
A3K91_0262
Transcription machinery [BR:
pali03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A3K91_0262
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF7645
Motif
Other DBs
NCBI-ProteinID:
AMT95896
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All DBs
Position
complement(309548..310573)
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AA seq
341 aa
AA seq
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MANTTTDAAKTSKKDSAAPIKNDARDAALKAAAQRPPYDASALGDTSTRDLVPAMPTHLS
APGVNLGAYINTVHQIPILTPLQEQELAHRYYDEGDVEAARLLVMSHLRFVIHIARSYSG
YGLPQADLIQEGNLGLMKAVKRFDPNKGVRLVSFAVHWIKAEIHEFVIRNWRIVKVATTK
AHRKLFFNLRSLKKTNNQLTLEEADAIAADLNVTRKQVLEMESRLTSYDASFEAQSSDDD
DGRYAPQLFLEDGIDPAEQLEEEDWEENNSSALIAAMGTLDDRSRDIVEQRWLSEQKSTL
HELAAVYSISAERVRQIEKNAMDKIRDAMTIDSVILPEDIQ
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggctaatactactactgatgctgcaaaaacgagtaaaaaagacagcgcagcacccata
aaaaatgacgcacgtgacgccgcgttaaaagccgctgcccagcgacccccttatgatgcg
agcgcgcttggcgataccagtactcgtgatttagtaccggctatgccgactcatttgtca
gcgcctggcgtcaacttgggtgcttatatcaatactgtgcatcaaatcccaattttgacc
ccgttacaagaacaggaattggcgcatcgctattacgatgaaggtgatgtggaagctgcg
cgactgctagttatgtcgcatttgcgttttgtgattcatattgcccgtagctattcagga
tatggcttgccgcaagcagatttgattcaagaaggcaatttgggactcatgaaggcggtc
aagcgctttgacccaaataaaggcgtgcgtctggtttcttttgctgtccattggatcaaa
gctgaaattcatgaattcgtcattcgtaactggcgcattgttaaagttgcgacgaccaaa
gcgcatcgcaaactgttctttaaccttcgtagcctcaaaaaaaccaacaaccaactgacg
ttggaagaagcggacgcgattgctgctgacttgaatgtcacgcgtaagcaagtgctcgaa
atggaatctcgtctcacttcttacgatgcatcgtttgaagcacaatcgagtgatgatgac
gatggccgctatgcaccgcagctgttcttagaagatggtattgatcctgctgaacagtta
gaagaagaagactgggaagaaaacaattcatccgccttaatagcagcgatgggcacattg
gatgatcgttcgcgtgatatcgtcgagcagcgctggctctctgagcaaaaatctactttg
catgagttggcagcggtctactccatctcggcagagcgggtacgccaaatcgagaaaaac
gccatggataaaattcgtgacgcgatgaccatcgatagtgttatcttgccagaagacatt
cagtag
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