Psychrobacter alimentarius: A3K91_0479
Help
Entry
A3K91_0479 CDS
T04320
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pali
Psychrobacter alimentarius
Pathway
pali03030
DNA replication
pali03410
Base excision repair
pali03420
Nucleotide excision repair
pali03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pali00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A3K91_0479
03410 Base excision repair
A3K91_0479
03420 Nucleotide excision repair
A3K91_0479
03440 Homologous recombination
A3K91_0479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pali03032
]
A3K91_0479
03400 DNA repair and recombination proteins [BR:
pali03400
]
A3K91_0479
Enzymes [BR:
pali01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A3K91_0479
DNA replication proteins [BR:
pali03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A3K91_0479
DNA repair and recombination proteins [BR:
pali03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
A3K91_0479
NER (nucleotide excision repair)
GGR (global genome repair) factors
A3K91_0479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
LPD26
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AMT96108
LinkDB
All DBs
Position
complement(575846..578824)
Genome browser
AA seq
992 aa
AA seq
DB search
MTDNTTDITTDSDHNSHQAINPETLPNFATMPNVATMSTDHVDKNQPPFILVDGSYYLFR
TYHALPKTMQNSQGLITNAIRGTLNALLKLMRRYHPTHMAVCFDTKSPTFRHHMSADYKA
GRPPIDIELVEQIPYIHRLVTALGIPLLRIEGAEADDIIGTLAHRAVEQGHHVVISTGDK
DMMQLVNDCVILEDSFTGKITDTQAVIDKFGINPNQMIDFLTLMGDTSDGIKGVPGIGKK
TAKDLLVEYGTIDNMLKHIGFIKGRGAKGLIDHADEIPFNAKLATIVTDLEIGQDWNDLK
INTDPCAHIDELRDLYSELEFRNELASLDHPNHPANGSQSVADSQAEAESQAQVAKYLQS
SKITDTKDSKSHDKAWHTVLDEPAFDSLVELLASVPHFVIDTETTSVHWREAQIVGLSFA
VKAHEAYYIPLTHSLEGDELTAKQLDRDMVLTRLKPILENPNIGKIGQHLKYDAHILAHY
DIDLVGALHEHPNNWAMDTMLASYVINAAVTRHGMDDLARHYLQTQTISYEDVAGKGAKQ
VTFDQVAIDIASDYACEDADITYQLFDVFSLEMANDSNNAKLLHELEIPTAQILCQMEAH
GILIKRPFLNELSKRFDEEIIALEKRAYEVAGEEFNLGSPKQLGEVLFEKLGVAGGKKTK
SGQYSTGEAVLSKIDHPLVEIVLEYRGLSKLKSTYTDALDNVADSETDRVHTSYHQALTS
TGRLSSTEPNLQNIPIRTATGRLIRQAFIAPEGRVILAADYSQVELRLMAHFSGDNNLTH
AFNEGLDIHAATAAEVLGKDVADVTPTERRNAKAINFGLLYGMSAFGLAKQLQMSRGEAQ
DYIDMYFERYPGVKNYMINTRASAYEKGYVETILGRKLYTPDINHSNRMVKQGAERAAIN
APLQGSAADLIKLAMIAVDKVLPKDQAKMLLQVHDELVFEVDADKVGAVSQLITHAMQDV
LTTTAVDKGWNIDFAVPLLVETDSGQNWDEAH
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataatacaaccgacatcaccacagacagtgatcataattcccaccaagccatc
aatcctgaaaccttaccaaactttgctaccatgcccaacgtcgcgacgatgagcaccgat
cacgtcgacaaaaaccagccgccttttatcttggtggatggctcttactatctgtttcgc
acatatcacgccttgcctaaaaccatgcaaaactcacaagggctgataaccaatgccatc
cgtggtacgctcaatgcgctattgaagctgatgcgtcgttatcatccgacccatatggcc
gtgtgctttgataccaagtctcctacctttcgccatcatatgtctgccgactataaagca
ggacgtccaccgatcgatattgagctggtcgagcagattccttatattcaccgcttggtc
accgccttaggtattccgctattgcgtattgaaggcgcagaagccgacgatatcattggt
acactggctcaccgtgcggttgaacaaggtcatcatgtggttatctcaactggtgataaa
gatatgatgcagctggtcaatgactgcgtgatattggaagacagctttacaggtaagata
acagacacccaagcagtgattgataagttcggcattaacccaaatcagatgatcgacttt
ttgaccttaatgggcgatacctctgatggtatcaaaggcgtgccgggtatcggtaaaaaa
acggccaaagacctgctcgttgagtatggcaccatcgacaacatgctaaaacacattggt
tttatcaaaggtcgcggtgcaaagggcttaattgatcatgccgatgagattccattcaat
gccaagcttgccaccatcgtcacagacttggagattggccaagattggaatgatttaaaa
atcaatactgacccttgtgcgcacatagacgaactacgcgatctatatagtgagcttgag
tttagaaatgagctggcctcgctcgatcatccaaatcatccagccaatggctcacaaagt
gtcgctgacagccaagccgaggctgaatcacaagcacaggtagcaaagtacttacagtcg
tcaaaaatcacggataccaaagacagtaaaagtcacgacaaagcatggcacacggtttta
gatgagccagcttttgacagtctagttgaattattagcatccgtgccgcattttgtcatt
gatactgagaccaccagcgtgcattggcgcgaggcgcaaatcgtcggtctatcgtttgcc
gtaaaagctcatgaagcctactatataccgcttacccacagcttagagggcgatgagcta
acagccaaacagcttgatcgcgacatggtattgacgcgcttaaagcctattttagaaaac
ccaaacattggcaaaattggtcagcatctaaagtacgatgcgcatattctcgctcactat
gacattgaccttgttggcgcgctccatgagcaccctaacaactgggcaatggataccatg
cttgccagctatgtgatcaatgcggcggtcactcgtcacggtatggacgacttggcacgc
cattatctacaaacccaaaccatcagctatgaagacgttgcgggcaaaggcgccaaacaa
gtcaccttcgatcaggtcgctattgatatcgccagtgattatgcctgtgaagatgcggac
attacttatcagttgtttgatgtattcagtttagagatggcaaatgacagcaataacgcc
aaattgctccacgagctagagattccaacagcacagatactttgccaaatggaagcgcac
ggcattcttatcaaacgaccattcttaaacgagctatcaaaacgctttgacgaagaaatc
atcgcattagaaaaacgcgcttatgaagtggctggagaagaatttaacctcggctcccct
aagcagcttggtgaagtattgtttgaaaagctgggtgttgctggtggtaaaaaaaccaag
tctggtcaatactcgacgggtgaagccgtgttatccaagattgaccatccattggtcgaa
atcgttcttgagtatcgtggtctctctaagctaaagagcacgtataccgatgcacttgat
aatgttgcagatagcgagaccgatcgtgtccataccagttatcaccaagccttgaccagt
acgggccgtttgtcttctacagagcccaatttacaaaacattccgattcgtacggcgacc
ggtcgcttaattcgccaagcgtttattgcaccagaaggtcgcgtcatcttggccgcggat
tactcacaagttgagttgcgtttgatggcgcatttttcaggcgataataaccttacccat
gcgtttaatgaagggctggacattcacgcggcgaccgctgctgaggtgcttggcaaggat
gtcgcggatgtcacaccaacggagcgccgtaatgccaaagccattaacttcggcctactg
tatggtatgagcgcttttggtcttgccaagcagttgcaaatgagccgcggtgaagcgcaa
gattacatcgatatgtattttgagcgttatcctggtgtcaaaaactacatgatcaacacg
cgtgccagtgcttatgagaaaggctatgtcgagaccatattgggccgtaagctctatacg
ccagatatcaatcatagcaaccgtatggtcaagcaaggcgctgaacgtgcggcgattaac
gcgccactacaaggctcagcggctgatttaatcaaacttgccatgattgcagtcgataaa
gtattaccaaaagatcaggccaaaatgttacttcaggtacatgatgaattggtgtttgaa
gttgatgccgataaggtgggtgcagtcagtcagctgattacccacgccatgcaagatgta
ttgaccacaacagcggtagacaaaggctggaatatcgactttgctgtgccattactggtc
gagacggacagtggccaaaactgggatgaggcgcattaa
DBGET
integrated database retrieval system
