Psychrobacter alimentarius: A3K91_1392
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Entry
A3K91_1392 CDS
T04320
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pali
Psychrobacter alimentarius
Brite
KEGG Orthology (KO) [BR:
pali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pali03400
]
A3K91_1392
DNA repair and recombination proteins [BR:
pali03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A3K91_1392
Archaeal homologous recombinant proteins
A3K91_1392
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
CobU
PrgU
Motif
Other DBs
NCBI-ProteinID:
AMT96996
UniProt:
A0ABM5ZY59
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Position
1710504..1712081
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AA seq
525 aa
AA seq
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MFARLMISPTMSIPDTPKYAATKSLKILHTSDWHLGRRLYGRLRYDEFESFLQWLEDTIS
AQQVNILIVAGDIFDTMTPSNKAQALYYEFLGRVSRSCCQHVVIVAGNHDSPTFLDAPSN
VLKFLNVHVIGTACDNLEDEVLVLGDDNNNPHCIIAAVPYLRDRDVRSSSAGESADSKDA
NVIKGIRTHYDEVASIAKGKQAELIKIHQRHIPIIATGHLFAAGGKTTDDDGVRDLYVGS
LGKISADMFDKSFDYVALGHLHVPQRVGGLESIRYSGSPIAMGFGEARQQKQVLLIQFGA
TESFDNDSLRPNAIPQLASTDTNVKTDTIETSAEKTIKKAPIQAGFIDDLFGFDEPAANH
EMATTAIQEDTDDQQEQEQDHKSKPNNDSDQMQVTSLPVPTFQQLAQISGDLTMIANTIK
ALILTESIWLEIVYTGDEIVSDLREQVQGMVEDLPCEVLKIKNTRTYNKILNQQQTSENL
QDLNEMEVFERCLTINDVADSQKDSLRDAYGQILYHLHHEDRQAE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcacgtttaatgataagccctactatgtccatacctgacacgcccaaatatgct
gccacaaaatctctaaagattttgcacacctccgattggcatttggggcgacgtctctac
ggtcgccttcgttatgatgagttcgaatcatttttgcagtggctagaagacactattagc
gcacagcaagtgaatatattgattgtcgcgggtgacatctttgataccatgacgcccagc
aataaagcccaagcgctatattatgagtttttgggtagggtctcacgttcctgctgtcag
catgtggtcattgtcgcaggcaatcatgactcaccaacatttttggatgcgccaagcaat
gtgctcaaatttttgaatgttcatgtgattggtacggcttgtgataatttagaagatgaa
gtattggtcttaggtgatgataataacaatcctcattgcatcatcgccgctgtgccctac
ttgcgtgatcgtgatgtgcgtagcagtagcgctggcgagtctgcggatagcaaggatgcc
aatgttatcaaaggtattcgcacccactatgatgaagtagcaagtattgcgaaaggaaag
caggcagaattaataaaaattcatcaacggcatattcctatcattgccacaggtcatcta
ttcgctgctggtggcaaaacaaccgatgatgatggcgtgcgcgatctctatgttggctca
cttggcaaaatctccgctgatatgtttgataagagttttgactatgtcgcccttgggcat
ttacacgtcccgcagcgcgttggtggtcttgaaagtattcgctactcaggctcacctatt
gcgatggggtttggtgaagctcgccagcaaaagcaagttttactcatacagtttggtgct
actgaatcttttgacaatgatagcttaaggccaaacgccattcctcagcttgccagcaca
gatactaacgttaaaactgacacgattgaaacgtcagcagaaaaaaccattaaaaaagca
cccatacaagctggttttatagatgacttgtttggctttgacgagccagctgctaatcat
gagatggcaacaacagctattcaagaggatactgacgaccagcaagagcaagagcaagac
cataaatccaaacctaataatgactcagatcaaatgcaagtcacgtccctacccgttcca
acatttcaacaactggcacaaatatctggtgacttaacaatgatcgccaataccatcaaa
gcgctgatcttaacagaatcgatttggttagaaattgtctatacaggtgacgagattgtc
agcgatttacgcgaacaggtacaagggatggtagaggatttgccatgtgaggtattaaaa
attaaaaacacgcgtacttataataaaattcttaatcagcagcaaacctctgagaacttg
caagacttaaatgagatggaagtgtttgagcgctgcttgacgataaatgatgtggctgat
tctcaaaaagactcattgcgcgatgcctatggtcagatactttatcacttacatcatgag
gacagacaggccgagtga
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