KEGG   Psychrobacter alimentarius: A3K91_1393
Entry
A3K91_1393        CDS       T04320                                 
Name
(GenBank) Exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
pali  Psychrobacter alimentarius
Brite
KEGG Orthology (KO) [BR:pali00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pali03400]
    A3K91_1393
DNA repair and recombination proteins [BR:pali03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     A3K91_1393
    Archaeal homologous recombinant proteins
     A3K91_1393
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 ABC_tran SMC_N AAA_21 R-HINP1I NTPase_1 AAA_22 AAA_16
Other DBs
NCBI-ProteinID: AMT96997
UniProt: A0A144P984
LinkDB
Position
1712169..1716032
AA seq 1287 aa
MRLIELRLKNLNSLKGEWHIDFADTAFTNEGIFAITGQTGAGKTTILDAICLALYGETPR
INSISKSSNEVMTRQTAECFAEVAIDLNGERYRCRWGQRRAYNKADGNLQDATHEIAKIN
TDDPSKEDELLESTLKHTKNKIIELTRMDFQQFTRSILLAQGSFSAFLKAKADERADILE
KITGTDIYATISAHVHNKKRTEEEILSKLQYGLDGLALLNTEEEDQLRAELQSYQSIQST
QQREIQDLAEKIKWLDSVTEAKEKLSVYQNDLDDAQQAQQDFIPNAKRLTAANKALEIDS
QFGQLTHNRDSLKRLQDEQQKINQTLPQQEDNRKQATTNLETAQAHLQAANEEWTVASPN
IREVRRLDVEIAQNKRTLEETQQREHTLSDKTQHLRQEIDNHKKEAARNQTQLAEVELNL
ANADEFNNIDSDIDNFGRHCGRLKTLLQDNADLIINQTSQKSNIDQYQSRLKTLHQQQEE
QANKEKALQVETKALQQQQTALIQVQSLADIRQEQEQIDGLNRQLEQIELKADKWHEISE
QIKDIDTALPAIQDDLVALADIIADKTHTIQSTKDKRQDKQTQLYLLQKVATLESHIADL
KDGHPCPLCGSLEHPYGANHPYLVSDTEADQIQQHITDLDAIISDLENTLSAHRISQATK
QQQFEQQQNQKNRLQDQAQKLAADIKQSVCLVLEENYSPFIAATIQPFQQLETQVDVLPL
LESTQHQLAERRSSLKDTLSNYETCGEQLATIRGDIGALVQQQHKLARDINEIEMDIKIK
SASMDTIDKKIHDNFSELTTLKNDIMQLLARYATGAFQSDAIMQIRASQPTLHPLMESID
SQVILNEADYHTHINTLRQQHAALTAVKNEFNNYKEQHQTLTTVLGRLEIQIDTKQTQLD
KDQQELDRLVQLVIEKTEALEQLQTNRANVFANKDPDAEEQRLREALEQAKTDQSVAQRQ
LDNAEYTLKQLLEKQQYVVEQIATVRSTLNTQEDSFKLILAASNFMDETDFANARLPIGE
RNTLKQQQERIDYALQQAQSLLKETEKTLEDKQANPLTTDDRETLTQQQAQVQEKFNSCI
ESIGAISQRLKDNEDKKNTQQAQIDAINAQKDKLQVWQQLHKLIGSSDGKKYRTFAQGLT
FDLMVNHANTQLQQMSDRYLLIRDDDSPLELNVIDNYQGGEIRSTKNLSGGEGFIISLAL
ALGLSQMASQNIRVDSLFLDEGFGTLDEESLDIALDTLTSLQQEGKLIGVISHVQALKDR
ILTQIKVEKLSGGFSQISGQGCWRITR
NT seq 3864 nt   +upstreamnt  +downstreamnt
atgcgcctcatcgaactcagactcaaaaacctcaattctttaaaaggcgaatggcacata
gatttcgctgataccgcttttaccaatgaaggcatctttgccatcacaggacagactggc
gctggcaagaccaccatattggacgccatctgtttagcattatatggtgaaacaccaagg
attaacagtatcagcaaaagcagcaatgaagtaatgacacggcaaacagcggaatgcttc
gctgaagttgcgattgatttgaatggtgagcggtaccgctgccgttggggacagcgccgt
gcttataataaagcggacggaaatttgcaagacgcaactcatgagatcgctaaaataaac
actgatgatccgtcaaaagaagatgagctgttagagagcactctaaaacacaccaaaaat
aaaatcattgaactaactcggatggattttcagcagttcactcgctcgatattactcgct
caaggcagtttttcagcttttttgaaagccaaagccgacgaacgtgctgacattttagag
aaaattacgggcactgatatttatgccaccatttcagcacacgttcataataaaaagcgc
actgaagaagagatattgagtaagctgcaatacggtttagatggcttggcgcttttaaat
accgaagaagaagatcagttaagagccgaattgcagtcatatcaaagtatacaaagtacg
cagcagcgagaaattcaagatttggccgaaaagataaagtggctagatagtgttacagaa
gcaaaagaaaagctgagtgtctatcaaaatgatcttgatgatgctcagcaagcgcagcaa
gattttattcctaatgctaaacgcttaaccgctgctaataaggcgttggagattgatagt
caatttggtcaactgacccacaatcgtgacagcctaaaacgcttgcaagatgaacagcag
aagataaatcagacattaccgcagcaagaagacaatcgaaagcaggctactacgaactta
gagacagcacaagctcatctacaagccgctaatgaagaatggactgtcgcctcgcctaac
attagagaggtgcgcagacttgatgtagaaattgcgcagaataagcgcaccttggaagaa
actcagcaaagggaacataccttatcagataaaactcagcatttacgccaagagatagat
aatcataaaaaagaagcagcgcgcaatcaaactcaattagcagaggtagagcttaacctc
gctaatgctgacgaattcaacaacattgatagcgatattgataactttggacgtcattgc
ggtcgtctaaaaacactgttgcaagacaatgctgatctaatcatcaaccagactagtcag
aaaagcaatatagaccagtatcaaagccgtcttaaaaccttgcatcaacaacaagaggaa
caagcgaataaagaaaaagctctgcaagttgagaccaaagcgctacaacaacagcaaacc
gccttgatccaagtacaatcattggctgatatacgccaagagcaagaacagattgatggc
cttaatcgtcagcttgaacaaatagagttaaaagcagataagtggcatgagattagcgaa
cagatcaaagatatagacaccgcgctaccagcaatacaagacgatctggtagcgcttgct
gatatcattgctgataaaacgcatactatccaatccactaaagacaagcggcaagacaaa
caaacacagctgtatctactacaaaaagtagccaccttagaaagtcacattgctgattta
aaagacggtcatccctgcccgctgtgcggatcgcttgagcatccttatggcgcaaaccat
ccgtatttggtatcagatactgaagcggaccagattcagcaacatataacagatctagat
gccatcatatccgacttggaaaataccttatctgcgcatcgtatcagtcaggcgaccaaa
caacagcagtttgagcagcagcaaaatcagaaaaaccgactacaagatcaagcacaaaaa
ctagcagctgatatcaagcagtcagtgtgtttagtgctggaggaaaactactcgccattt
atcgcggcaacgatacagccattccagcaacttgagacacaggtagatgtactaccgttg
ttagagagcactcagcatcaacttgccgaacgtagaagctctcttaaagacacgctgtcc
aactatgaaacgtgtggcgagcagcttgctactatccggggcgacattggcgctttagta
caacagcagcacaagctggcaagggatattaatgagattgagatggatattaaaataaaa
tccgcgagtatggatacgatagataaaaaaattcacgataatttttctgaattaaccact
cttaaaaatgacatcatgcagctattagcgagatacgccactggcgcgtttcagtcagac
gcaatcatgcagatacgcgcctcacagcctactttacaccccctgatggaaagtattgat
agccaagttatcctaaacgaggcggattatcatacgcatatcaatacattgcgtcagcag
cacgctgcgcttacggctgtaaaaaatgagtttaataactataaagagcagcatcaaaca
ctgacgacagtactaggtcgtctagaaatacagatcgataccaaacaaacccagttggat
aaagaccaacaggagcttgataggctggttcaactcgtgattgaaaaaacagaggcgctt
gagcagttacaaacaaacagagcaaatgtattcgctaacaaagatcctgatgcagaagag
cagcgtttgcgcgaggcgttagaacaagcaaaaaccgatcagtctgttgcccaaagacaa
ctagacaatgctgagtacacacttaaacaattacttgagaaacagcaatatgtggttgaa
caaatagccacggtgagaagtacgctcaacactcaagaagatagctttaagttgatactt
gctgcttctaattttatggatgaaacggattttgcgaatgcgcggttgccaattggtgag
cgtaatacgctcaagcagcagcaagaacgtattgattatgcgctccagcaagcgcagtct
ctgttaaaagaaaccgagaaaacattggaagataagcaagctaatccgctgacaacagac
gatcgagagacacttactcagcagcaagcgcaagtccaagagaagtttaatagctgcatt
gagtctattggtgcgatcagtcagcgtctaaaagacaacgaagataagaaaaacacccag
caagcacaaattgatgccatcaatgcccaaaaggataagttgcaagtttggcaacaactg
cataaattgattggctcatccgatggcaaaaaataccgcacctttgctcaaggcctcact
tttgatctcatggtcaatcatgccaacactcagctacaacaaatgagtgatcgttacctg
ctgatccgtgatgatgacagcccgcttgaattgaacgtcatcgacaattatcaaggtggt
gagattcgtagcaccaaaaacctgtcaggcggtgaagggttcattatcagtctggcactt
gcgctaggactttcacaaatggccagtcaaaatatccgcgtggactcactatttttagat
gaaggatttggtacattagatgaggaatcattggatattgcactggataccctcaccagc
ttacagcaagaaggcaaattgatcggtgtaatctctcatgtgcaggctttaaaagaccgt
attttaactcagattaaagttgaaaagctctctggcggctttagtcagatcagtggtcaa
ggttgctggcgaatcacccgctaa

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