Psychrobacter alimentarius: A3K91_1393
Help
Entry
A3K91_1393 CDS
T04320
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pali
Psychrobacter alimentarius
Brite
KEGG Orthology (KO) [BR:
pali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pali03400
]
A3K91_1393
DNA repair and recombination proteins [BR:
pali03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A3K91_1393
Archaeal homologous recombinant proteins
A3K91_1393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
SMC_N
R-HINP1I
NTPase_1
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AMT96997
LinkDB
All DBs
Position
1712169..1716032
Genome browser
AA seq
1287 aa
AA seq
DB search
MRLIELRLKNLNSLKGEWHIDFADTAFTNEGIFAITGQTGAGKTTILDAICLALYGETPR
INSISKSSNEVMTRQTAECFAEVAIDLNGERYRCRWGQRRAYNKADGNLQDATHEIAKIN
TDDPSKEDELLESTLKHTKNKIIELTRMDFQQFTRSILLAQGSFSAFLKAKADERADILE
KITGTDIYATISAHVHNKKRTEEEILSKLQYGLDGLALLNTEEEDQLRAELQSYQSIQST
QQREIQDLAEKIKWLDSVTEAKEKLSVYQNDLDDAQQAQQDFIPNAKRLTAANKALEIDS
QFGQLTHNRDSLKRLQDEQQKINQTLPQQEDNRKQATTNLETAQAHLQAANEEWTVASPN
IREVRRLDVEIAQNKRTLEETQQREHTLSDKTQHLRQEIDNHKKEAARNQTQLAEVELNL
ANADEFNNIDSDIDNFGRHCGRLKTLLQDNADLIINQTSQKSNIDQYQSRLKTLHQQQEE
QANKEKALQVETKALQQQQTALIQVQSLADIRQEQEQIDGLNRQLEQIELKADKWHEISE
QIKDIDTALPAIQDDLVALADIIADKTHTIQSTKDKRQDKQTQLYLLQKVATLESHIADL
KDGHPCPLCGSLEHPYGANHPYLVSDTEADQIQQHITDLDAIISDLENTLSAHRISQATK
QQQFEQQQNQKNRLQDQAQKLAADIKQSVCLVLEENYSPFIAATIQPFQQLETQVDVLPL
LESTQHQLAERRSSLKDTLSNYETCGEQLATIRGDIGALVQQQHKLARDINEIEMDIKIK
SASMDTIDKKIHDNFSELTTLKNDIMQLLARYATGAFQSDAIMQIRASQPTLHPLMESID
SQVILNEADYHTHINTLRQQHAALTAVKNEFNNYKEQHQTLTTVLGRLEIQIDTKQTQLD
KDQQELDRLVQLVIEKTEALEQLQTNRANVFANKDPDAEEQRLREALEQAKTDQSVAQRQ
LDNAEYTLKQLLEKQQYVVEQIATVRSTLNTQEDSFKLILAASNFMDETDFANARLPIGE
RNTLKQQQERIDYALQQAQSLLKETEKTLEDKQANPLTTDDRETLTQQQAQVQEKFNSCI
ESIGAISQRLKDNEDKKNTQQAQIDAINAQKDKLQVWQQLHKLIGSSDGKKYRTFAQGLT
FDLMVNHANTQLQQMSDRYLLIRDDDSPLELNVIDNYQGGEIRSTKNLSGGEGFIISLAL
ALGLSQMASQNIRVDSLFLDEGFGTLDEESLDIALDTLTSLQQEGKLIGVISHVQALKDR
ILTQIKVEKLSGGFSQISGQGCWRITR
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcatcgaactcagactcaaaaacctcaattctttaaaaggcgaatggcacata
gatttcgctgataccgcttttaccaatgaaggcatctttgccatcacaggacagactggc
gctggcaagaccaccatattggacgccatctgtttagcattatatggtgaaacaccaagg
attaacagtatcagcaaaagcagcaatgaagtaatgacacggcaaacagcggaatgcttc
gctgaagttgcgattgatttgaatggtgagcggtaccgctgccgttggggacagcgccgt
gcttataataaagcggacggaaatttgcaagacgcaactcatgagatcgctaaaataaac
actgatgatccgtcaaaagaagatgagctgttagagagcactctaaaacacaccaaaaat
aaaatcattgaactaactcggatggattttcagcagttcactcgctcgatattactcgct
caaggcagtttttcagcttttttgaaagccaaagccgacgaacgtgctgacattttagag
aaaattacgggcactgatatttatgccaccatttcagcacacgttcataataaaaagcgc
actgaagaagagatattgagtaagctgcaatacggtttagatggcttggcgcttttaaat
accgaagaagaagatcagttaagagccgaattgcagtcatatcaaagtatacaaagtacg
cagcagcgagaaattcaagatttggccgaaaagataaagtggctagatagtgttacagaa
gcaaaagaaaagctgagtgtctatcaaaatgatcttgatgatgctcagcaagcgcagcaa
gattttattcctaatgctaaacgcttaaccgctgctaataaggcgttggagattgatagt
caatttggtcaactgacccacaatcgtgacagcctaaaacgcttgcaagatgaacagcag
aagataaatcagacattaccgcagcaagaagacaatcgaaagcaggctactacgaactta
gagacagcacaagctcatctacaagccgctaatgaagaatggactgtcgcctcgcctaac
attagagaggtgcgcagacttgatgtagaaattgcgcagaataagcgcaccttggaagaa
actcagcaaagggaacataccttatcagataaaactcagcatttacgccaagagatagat
aatcataaaaaagaagcagcgcgcaatcaaactcaattagcagaggtagagcttaacctc
gctaatgctgacgaattcaacaacattgatagcgatattgataactttggacgtcattgc
ggtcgtctaaaaacactgttgcaagacaatgctgatctaatcatcaaccagactagtcag
aaaagcaatatagaccagtatcaaagccgtcttaaaaccttgcatcaacaacaagaggaa
caagcgaataaagaaaaagctctgcaagttgagaccaaagcgctacaacaacagcaaacc
gccttgatccaagtacaatcattggctgatatacgccaagagcaagaacagattgatggc
cttaatcgtcagcttgaacaaatagagttaaaagcagataagtggcatgagattagcgaa
cagatcaaagatatagacaccgcgctaccagcaatacaagacgatctggtagcgcttgct
gatatcattgctgataaaacgcatactatccaatccactaaagacaagcggcaagacaaa
caaacacagctgtatctactacaaaaagtagccaccttagaaagtcacattgctgattta
aaagacggtcatccctgcccgctgtgcggatcgcttgagcatccttatggcgcaaaccat
ccgtatttggtatcagatactgaagcggaccagattcagcaacatataacagatctagat
gccatcatatccgacttggaaaataccttatctgcgcatcgtatcagtcaggcgaccaaa
caacagcagtttgagcagcagcaaaatcagaaaaaccgactacaagatcaagcacaaaaa
ctagcagctgatatcaagcagtcagtgtgtttagtgctggaggaaaactactcgccattt
atcgcggcaacgatacagccattccagcaacttgagacacaggtagatgtactaccgttg
ttagagagcactcagcatcaacttgccgaacgtagaagctctcttaaagacacgctgtcc
aactatgaaacgtgtggcgagcagcttgctactatccggggcgacattggcgctttagta
caacagcagcacaagctggcaagggatattaatgagattgagatggatattaaaataaaa
tccgcgagtatggatacgatagataaaaaaattcacgataatttttctgaattaaccact
cttaaaaatgacatcatgcagctattagcgagatacgccactggcgcgtttcagtcagac
gcaatcatgcagatacgcgcctcacagcctactttacaccccctgatggaaagtattgat
agccaagttatcctaaacgaggcggattatcatacgcatatcaatacattgcgtcagcag
cacgctgcgcttacggctgtaaaaaatgagtttaataactataaagagcagcatcaaaca
ctgacgacagtactaggtcgtctagaaatacagatcgataccaaacaaacccagttggat
aaagaccaacaggagcttgataggctggttcaactcgtgattgaaaaaacagaggcgctt
gagcagttacaaacaaacagagcaaatgtattcgctaacaaagatcctgatgcagaagag
cagcgtttgcgcgaggcgttagaacaagcaaaaaccgatcagtctgttgcccaaagacaa
ctagacaatgctgagtacacacttaaacaattacttgagaaacagcaatatgtggttgaa
caaatagccacggtgagaagtacgctcaacactcaagaagatagctttaagttgatactt
gctgcttctaattttatggatgaaacggattttgcgaatgcgcggttgccaattggtgag
cgtaatacgctcaagcagcagcaagaacgtattgattatgcgctccagcaagcgcagtct
ctgttaaaagaaaccgagaaaacattggaagataagcaagctaatccgctgacaacagac
gatcgagagacacttactcagcagcaagcgcaagtccaagagaagtttaatagctgcatt
gagtctattggtgcgatcagtcagcgtctaaaagacaacgaagataagaaaaacacccag
caagcacaaattgatgccatcaatgcccaaaaggataagttgcaagtttggcaacaactg
cataaattgattggctcatccgatggcaaaaaataccgcacctttgctcaaggcctcact
tttgatctcatggtcaatcatgccaacactcagctacaacaaatgagtgatcgttacctg
ctgatccgtgatgatgacagcccgcttgaattgaacgtcatcgacaattatcaaggtggt
gagattcgtagcaccaaaaacctgtcaggcggtgaagggttcattatcagtctggcactt
gcgctaggactttcacaaatggccagtcaaaatatccgcgtggactcactatttttagat
gaaggatttggtacattagatgaggaatcattggatattgcactggataccctcaccagc
ttacagcaagaaggcaaattgatcggtgtaatctctcatgtgcaggctttaaaagaccgt
attttaactcagattaaagttgaaaagctctctggcggctttagtcagatcagtggtcaa
ggttgctggcgaatcacccgctaa
DBGET
integrated database retrieval system
