Psychrobacter alimentarius: A3K91_2535
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Entry
A3K91_2535 CDS
T04320
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pali
Psychrobacter alimentarius
Brite
KEGG Orthology (KO) [BR:
pali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pali03021
]
A3K91_2535
Transcription machinery [BR:
pali03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
A3K91_2535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
Tudor_RapA
ResIII
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMT98106
UniProt:
A0ABN4N6L6
LinkDB
All DBs
Position
complement(3079770..3082658)
Genome browser
AA seq
962 aa
AA seq
DB search
MTISIASLHSTEFAVGQRYLSDTESELGLGVVIDVDDRCVHILFPQSEETRVYAKNSAPL
SRVVFKIGDSIYDQDGKCYTVNAVDEVMGVLKYGVDEHERGIMETRLAANITLAKPLERL
LAGRIERGDWYELRQDILRMQSALAGHPLKGLMGARVDIIEHQLYIAHEVGKRIAPRVLL
ADEVGLGKTIEAGLIIHQQLLTGKAERVLILVPDSLQYQWMIELRRRFNLNFALFDLVRT
AAIKEHDPEQNVFATEQCIIAGMDLLLDHPDLYDQAMEAGFDLLVVDEAHHLHWDEAQGG
NDKYDLIADFAEETPGVMLLTATPEQLGAQSHFARLRLLDPDRFDDLDEFIDGQEAFAET
AAVASVLIEDKPVSEGQIAALSSLLDINIDELAAINDDEKLRTYALNELLDRHGTGRILF
RNTRESVKGFYGRSSQPYPLPLPEAWKDSYQTNGKLREQLWGEENQPDGGWLEDDPRVPW
LIDILKGDLKHNKVLLIARSGATVESLEAVLRLHAGIKTAIFTEQMTLLERDQAAAFFAD
SEGAQILLCSEIGSEGRNFQFASQLILWDLPANPDTLEQRIGRLDRIGQTQQIMLHVPYV
QGTAQERLYQWYNDALNMFNQISPTAQSVQEQYIQELKPMLEGADTDDNRTTLQNVIAEA
LQTRLGLEAQLQAGRDRLLEYNSCRPRVAGRIADAMRDFDSHNLLPQFIERFFASANIDH
NIQRDGSWVIAPIDSTEISDYIDGLPLGDEDGMTLTFEREQALQREDIDFITHEHPLMRA
IYELASTSTFGNTTVAMLKSAAVPQGMVLLEVNFRVEAIAPKVLNLPATLTTQNIRVFIS
EQGSDLSARISADMIMPHIERLDKNRARQVIKVRGDVIEQRYYEAEDIAREQLTEIGAQA
SARFSQQWSREIKRLKHLQTINPNVRPEEIERLEQLKAQGEQALGNLSLVPDSIRVLVAV
KP
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgactatttctattgcttcattgcacagcaccgaattcgccgttggtcaacgttattta
tctgatacggagtccgagctgggcttgggtgtggtcatcgatgtagacgaccgatgtgtc
catattctattccctcaaagtgaagagacacgcgtctatgccaaaaactctgcgccttta
tcacgcgtggtgttcaaaattggtgacagcatttatgaccaagacggcaaatgctataca
gtcaatgcggttgacgaagtcatgggcgtactcaagtacggtgtcgatgagcacgaaaga
ggcattatggagacccgtcttgcggccaatattacgctagcaaagccgcttgaacgtctg
ctcgctggtcgtattgagcgcggtgattggtacgagctgcgtcaagatatcttgcgtatg
cagtcggcgcttgccggtcacccactcaaaggcttgatgggcgcacgtgtcgatattatc
gaacatcagctctatatcgcgcatgaagtgggcaaacgtatcgcgccacgtgtattgcta
gccgatgaagttggccttggtaaaaccattgaagcgggtttgattattcatcagcagcta
ctgacaggcaaggctgagcgtgtacttatccttgtaccagacagtttgcaatatcagtgg
atgattgagctgcgtcgccgttttaatctgaactttgcgttgtttgatttggtgcgtact
gctgcgatcaaagagcacgatcctgagcaaaacgtctttgccactgagcagtgtatcatc
gctggtatggatctgctgcttgaccatcctgatttgtatgaccaagcgatggaggctggg
tttgacctgttggtcgtcgatgaggcgcatcacttgcattgggatgaagcgcaaggcggc
aacgacaaatacgatttgattgcagactttgcagaagagacgccaggcgtcatgctattg
accgcgacccctgagcagcttggcgcgcaaagtcactttgcccgtttgcgcctattagat
cctgatcgttttgatgatttagatgagttcatcgatggtcaagaagcatttgctgaaaca
gcggcagttgctagcgtgttgatagaagacaagccagtaagtgagggtcaaattgccgcg
ttgagtagtttgttagacatcaatattgacgagcttgcagcaatcaacgacgatgaaaaa
ttgcgaacctatgcgcttaacgagttactcgatcgtcatggtacgggccgtatcttgttc
cgcaatacacgtgagagtgtaaaaggcttttatggtcgtagcagtcagccatacccactg
ccattacctgaggcttggaaagacagttatcaaactaatggcaaattgcgtgagcagcta
tggggcgaagaaaaccagccggatggtggctggttagaggacgacccacgtgtgccttgg
ttaattgacatcttaaaaggcgatctcaaacacaataaagtgttactgattgcgcgtagt
ggcgcgacagttgagagtttagaggcagtattgcgcttacatgcaggtattaagacggct
atctttactgagcaaatgactctgcttgagcgtgaccaagcggcggcattttttgccgat
agcgaaggcgcacagatactattatgttcagagattggttcagaaggccgtaacttccag
tttgccagtcaattaatactatgggatttgcctgccaatccggataccttagagcagcgc
attggacgtctagaccgtattgggcaaacacagcaaatcatgctgcatgtcccatacgta
caaggcacggcgcaagagcgtctgtaccaatggtataacgatgcgctcaacatgtttaat
cagatttcaccaaccgctcaaagcgtgcaagagcaatatattcaagagctaaaaccaatg
cttgagggtgcggataccgatgacaatcgcaccaccttacaaaatgtgattgcagaggca
ctacagacacgtttggggctagaagctcagctacaagccggccgtgatcgtctgcttgag
tacaattcgtgccgtccgcgcgttgcagggcgtatcgctgatgccatgcgtgattttgat
agtcacaatttattgccgcaatttatcgagcgcttctttgcctcagccaatatcgatcac
aatattcaacgtgatggctcatgggtcattgccccgattgatagcactgagatcagtgat
tatatcgatggcttgccactcggtgatgaagacggcatgacgctgacctttgagcgtgag
caagcgttacagcgcgaagatattgacttcatcacgcatgagcatccattgatgcgtgcc
atctatgagctggcgagcaccagcacctttggtaataccacggttgccatgctaaaaagt
gctgcagtaccacaaggcatggtattgcttgaagtgaattttcgtgtggaagcgattgcg
ccaaaagtcctgaatctgccagcgacattgaccacacagaacattcgcgtctttatcagt
gagcagggcagcgatttgtcagcccgtatcagcgccgacatgattatgccgcatattgag
cgtttggataaaaatcgtgcgcgccaagtgattaaagtgcgcggggatgtgattgagcag
cgttattatgaagccgaagacattgctcgtgagcaactaacagagattggtgcgcaggca
agcgcgcgctttagccagcaatggtcacgtgaaatcaaacgcctcaagcatctgcaaacc
atcaatcctaacgtacgccctgaagagattgagcgtctagagcaactaaaagcgcaagga
gagcaagcgctcggtaatttatccttagtgccagattctattcgtgtattggtcgccgta
aaaccttaa
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