Pendulispora albinea: LZC94_00640
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Entry
LZC94_00640 CDS
T10974
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
palj Pendulispora albinea
Brite
KEGG Orthology (KO) [BR:
palj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palj03016
]
LZC94_00640
Enzymes [BR:
palj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
LZC94_00640
Transfer RNA biogenesis [BR:
palj03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
LZC94_00640
Prokaryotic type
tRNA splicing ligases
LZC94_00640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WXB15786
UniProt:
A0ABZ2LXY3
LinkDB
All DBs
Position
158334..159521
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AA seq
395 aa
AA seq
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MSRIVFEPERGQRVPVRIWARALGEATLRQLQHIASQPYVVEHVAAMADAHVAEGVAVGT
VFATEHTVVPRALGGDLGCGMSAVRLGARSDSLDRRALERVITQLGKAIPTGDSTHRGRG
VPVPDPLLAEPLSTRALEHTREALTRRHLGTLGGGNHFLELERDPEGYLWVLVHSGSRGL
GAAIAAHHARAAEAVPPATDEASARGALAGLDTRTEHGAAYLRDLTWALAFARANRAALL
ARALDVLSDTSHASHGAGEPLVDIHHNFVARERWFGRELLVHRKGAVSVPSGTMALIPGS
MGTASYIVEGLGHEAAFGSCSHGAGRVMSRKEARARIRAPAFARSMRRVVYPKHLEAGLV
EEAPAAYRDIVEVLDDQGDLVRRVLRLEPVAVLKG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgcatcgtcttcgaaccggaacggggccaacgcgtcccggtccggatctgggcg
cgcgcgctcggcgaggccacattgcggcagcttcagcacatcgcctcgcaaccgtatgtg
gtggagcacgtggccgccatggccgacgcgcacgtggccgaaggggtggcggtggggacc
gtctttgcgacggagcacaccgtcgttccgagggcgctcggcggcgacttggggtgcggc
atgtccgccgttcgcctgggcgcgcgctccgattcgctcgaccggcgcgccctcgagcgg
gtcataacccagcttggaaaagccattccaaccggcgattccacccaccgcgggcgcgga
gttcccgtccccgatccgctcctcgccgagccgctctcgacgcgcgcactggagcacacc
cgcgaggcgctcacccgccgccacctcggcaccttgggcggcggcaatcattttctcgag
ctggaacgcgatccggagggatacctctgggtgctcgtgcactccggatcgcgcggtctg
ggtgcagccatcgcggcgcaccacgcccgcgccgccgaagccgttccacctgccacggac
gaggcctccgcacggggcgccctcgccggtctcgacacgcgaacggagcacggcgcggcg
taccttcgcgatctcacgtgggccctcgcctttgcgcgcgccaatcgcgccgcgctcctc
gcgagggcgctcgacgtcctctccgatacgagccacgcctcgcacggcgccggcgagccg
ctcgtcgacattcaccacaacttcgtcgcgcgcgagcgatggttcggtcgcgaactcctc
gttcatcgaaagggcgccgtttccgttccatccggcacgatggcgctcatccccggatcg
atggggacggcgagctacatcgtggagggcctggggcacgaggccgcctttggatcgtgc
tcccatggcgccgggcgcgtcatgagccgcaaggaagcacgggcgcgcattcgtgcacct
gcgtttgcgcgatccatgcggcgcgtcgtgtacccgaagcacctcgaagctggcttggtc
gaggaagcgcctgcggcgtaccgcgatatcgttgaagtattggacgatcagggcgatttg
gtgcgccgcgtcctgaggctcgaaccggtcgccgttctcaaaggatga
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