Pendulispora albinea: LZC94_06810
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Entry
LZC94_06810 CDS
T10974
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
palj Pendulispora albinea
Pathway
palj03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
palj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LZC94_06810 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LZC94_06810 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
nSTAND1
AAA_29
RsgA_GTPase
AAA_16
AAA_25
AAA_28
nSTAND3
DUF7351
DnaJ_CXXCXGXG
DUF4350
Motif
Other DBs
NCBI-ProteinID:
WXB16978
LinkDB
All DBs
Position
1648969..1651878
Genome browser
AA seq
969 aa
AA seq
DB search
MLKHRTKSAKEPDFVQVIGAREHNLKIDEIAVPKRKLVVFTGPSGSGKSSLAFDTLYAEG
QRRYIETLSAYARQFLGQLERPKVDHLRGLSPTIAIEQKSASSNPRSTVGTITEVYDYLR
VLYAKLGDQHCPKCGKKVAAQGAQAITREILALPEGTSVTLYAPQATHRKGEYRELFEDL
RARGFVRVRIDGKIERLEDVTALDKKKKHSIDLVIDRIVLKAEDRARIAEGVELGLREGK
GELRVDTGKGEVLFSESRSCCGIAFPELSPQSFSFNSPLGMCPSCNGLGMRDEVDPALII
PDPSLSIRDGAIAPWATAMARGEGWTARIINGVAKAFGVNLDIPWKKIPKAKQHAILYGG
GEERIAIRWGKEGSTSHGTWAMKYEGVVPNIERKFRETASDSARELYRRYLRERPCDACG
GKRLRPESLFVLVAGKGITEITEKTIAEVAAHFESMVLPPSDRQISAGALLEIRSRLRFL
LDVGLDYITLDRKATTLSGGEAQRIRLASQLGSELSGVMYVLDEPSIGLHARDNSHLIAT
LHRLRDLGNSVIVVEHDAETIMASDHVVDFGPGAGLLGGSVTFSGTPDELMASESLTGLY
LSGKRRIEVPKDRRTPRAWLEVKGAREHNLRGIDVKIPVGVLTAVTGVSGAGKSSLVNGI
LLPALAHALHDSADPIGAHEAILGLDAFDKVIAIDQKPIGRTPRSNPGTYTKAFDMIREI
FAELPDARARGYGAGRFSFNVKGGRCESCGGDGMVKVEMHFLADVYVPCSACDTKRYNAE
TLQVRFKGKSIHDVLESSIEECREHFQAFPALTRVLDKLVEVGLGYMKLGQQATTLSGGE
AQRVKLSRELGKVQTGRTLYVLDEPTTGLHFDDIQKLLAVLQRLVDAGNTVVVIEHNLDV
IKCADWLIDLGPEGGARGGTLLAEGTPEAVARVAASYTGRYLAPLLETRKARVKRAVRAE
NGAPVAGEA
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaacatcgaacgaagagcgccaaagagccggatttcgtccaggtcatcggtgcg
cgcgaacacaacctcaagatcgatgaaatcgccgtccccaagcgcaagctggtcgtcttt
accggccccagtgggtcgggcaaatcgagcctcgccttcgacaccctctacgccgagggc
cagcgccgctacatcgagaccctgagcgcctacgcccggcaatttttgggtcagctggaa
cgccccaaggtcgatcacctgcgcggcctctcgcccacgattgccatcgagcaaaagagc
gcctcgtccaatccgcgctccacggtgggcaccatcaccgaggtgtacgactacctccgc
gtcctctacgccaagctgggcgatcagcactgccccaagtgcggaaagaaggtcgccgcc
cagggcgcgcaggccattacccgcgagatcctggccctccccgagggcaccagcgtgacc
ctgtacgcgccgcaagccacccaccgcaaaggcgaataccgcgagctcttcgaagacctt
cgcgcccgcggtttcgtgcgcgtgcgcatcgacggcaaaatcgagcgcctcgaggacgtc
accgcgctcgacaaaaagaagaagcactccatcgacctggtgatcgaccgcatcgtgctc
aaggcggaagaccgggcgcgcatcgccgagggcgtcgagctcgggctccgcgaaggaaaa
ggggagctccgcgtcgacaccggcaaaggcgaggtcctcttcagcgaatcgcgttcgtgc
tgcggcatcgccttccccgagctctcgccgcagagcttctccttcaactcgcccctcggc
atgtgcccctcgtgcaacggcttgggcatgcgcgacgaggtcgacccggcgctcatcatc
ccggacccctcgctctcgatccgcgacggcgccatcgccccgtgggccacggccatggcg
cgcggggagggctggaccgcgcgcatcatcaacggcgtggccaaggccttcggcgtcaac
ctcgacatcccgtggaagaagatccccaaggccaagcaacacgccatcctctacggggga
ggcgaggagcgcatcgccatccgctggggcaaggagggctccaccagccacggcacctgg
gcgatgaagtacgagggcgtcgtccccaacatcgagcgcaagttccgcgagacggcctcc
gactccgcgcgcgagctgtaccgccgctacttgcgtgagcgcccttgcgatgcgtgcggc
ggcaagcggctgcggcccgagagcctgttcgttttggtggccggcaagggcatcacggag
atcacggagaagacgatcgcggaggtcgcggcgcacttcgagtcgatggtgctcccgccc
tcggatcggcagatcagcgcgggcgcgctgctcgagatccgcagccgtctgcgcttcttg
ctcgacgtggggctggactacatcaccttggatcgcaaagcgaccaccttgagcggcggc
gaggcgcagcgcattcgcctggcgagccagctggggagcgagctatccggcgtcatgtac
gtgctcgacgagccgagcatcgggctgcacgcgcgcgacaattcgcatttgatcgcgacc
ttgcaccgcttgcgcgatctgggcaacagcgtcattgtcgtggagcacgacgccgagacg
atcatggcctcggatcacgtggtcgacttcggccccggcgcgggcctcctgggcggcagc
gtgaccttcagcgggaccccggacgagctgatggcgagcgagagcctcacgggcttgtac
ctctcgggcaagcgccgcatcgaggtccccaaggatcggcgcacaccgcgcgcatggctg
gaggtcaagggcgcacgcgagcacaacctgcgcggaatcgacgtgaaaattccggtgggc
gtgctcacggcggtcacgggggtgagcggcgcgggcaagagctcgctcgtgaacggcatt
ttgctaccggcgctggcgcacgcgctccacgacagcgccgatcccatcggcgcgcacgag
gcgatcctgggcttggacgccttcgacaaagtgatcgccatcgatcaaaagccgatcggg
cggaccccgcgctccaaccccggcacgtacaccaaggcgttcgacatgatccgcgagatc
ttcgccgagctgcccgacgctcgcgcgcgcggctatggcgccgggcgattcagcttcaat
gtaaagggcgggcgctgcgagtcctgcggcggcgacggcatggtcaaagtggagatgcac
tttttggccgacgtctatgtgccgtgctcggcctgcgacacgaagcgctacaacgcggag
acgttgcaagtgcgattcaagggaaagtcgatccacgacgtcctcgagtcgagcatcgaa
gagtgccgcgagcacttccaggcgtttcccgcgctgacgcgcgtgctcgacaaattggtc
gaggtggggctcgggtatatgaagctcgggcaacaggcgaccacgttgagcggcggcgag
gcgcagcgcgtgaagttgagccgcgagctcggcaaagtgcagaccgggcgcacgctctac
gtgctggacgagccgaccacggggctccatttcgacgatattcagaagctcttggccgtg
ttgcagcggctcgtcgatgcggggaacacggtggtcgtgatcgagcacaatctggacgtc
atcaagtgcgcggattggctgatcgacctcgggccggaaggcggggctcggggggggacg
ttgctcgccgagggaacgccggaggcggtcgcgcgggtggcggcgtcgtatacggggcgg
tacttggcgccgttgctcgagacgcgcaaggcgcgcgtgaaaagggcggtgcgggcggag
aatggcgcgccggtggcgggcgaggcgtaa
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