Pendulispora albinea: LZC94_17300
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Entry
LZC94_17300 CDS
T10974
Name
(GenBank) ATP-binding domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
palj Pendulispora albinea
Pathway
palj03420
Nucleotide excision repair
palj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
palj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LZC94_17300
03430 Mismatch repair
LZC94_17300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palj03400
]
LZC94_17300
Enzymes [BR:
palj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LZC94_17300
DNA repair and recombination proteins [BR:
palj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LZC94_17300
MMR (mismatch excision repair)
Other MMR factors
LZC94_17300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD_C
UvrD-helicase
AAA_19
DEAD
AAA_30
AAA_22
NB-ARC
AAA_25
ResIII
SLFN-g3_helicase
AAA_16
AAA_12
NACHT
AAA_29
ADDB_N
nSTAND3
Ig_CycH
Motif
Other DBs
NCBI-ProteinID:
WXB18981
LinkDB
All DBs
Position
complement(4392668..4394812)
Genome browser
AA seq
714 aa
AA seq
DB search
MAAENIGVRSQARAVRELTAGEWIIVAEQKRLAAAAREAARRGKAGAPPYFAHMRICSAG
RARDVLLGLDSHIDTSAEGGITVVDYRRAPIAEVFFACEPGDEYEIEVNGRTVTGILERR
HLVTFEEDEPSAITVPNGALRQVDGTWRFETGVLLPTFSRAPGQPLAVDLFGRGPDFQRN
MAALLSSDQTALLERDPNETVLVLGAAGSGKTTVAIHRVASIARARKGDFDPKKALVIVP
EAGLRHLAERMLRDLGLDAVAVRTFDDWIRAEARRIFPWLPAREAPETPLGARRIKRHPA
LFSAIDALLDQRTRELAARIDRVHAGRGAIQRALEARREPILEKRLERGAVEVLAAASPK
QRPLLEEAFREELRKLEDVREDLYALVGDRALLAHAVRDSGGDLTRAGVEQTAEHTRRQL
DEPSEIRFAHVDADRLVTLDGRSLDDGTPDAVAGTVDIEDYAVLFELLWRKTGRTQTRAG
KLRRARHLVVDEAQSLTSIELRVLGHALHGNATIAGDEAQVIDGDGYFTSWDDTLSALGV
RTTASYLKTSYRCPRPILDAAYAILGPEAAAAKPAAVRDGGPVLHTVLPNEGHAAVFVAE
ALRGLARTEPRAMVAVIAHDAATARAVHDVVARALPARLVLDGDFAFAPGVEITEVAQVK
GLEFDYVIVPDANAPSYPDTPLHRRMLHVALTRAIHQVWILSPGEPSRCLAGGT
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggaaaacatcggggtacggtcgcaagcccgcgctgtgcgcgagttgacggcc
ggggaatggatcatcgtcgccgagcagaaacggctggcggctgcggcgcgtgaagctgcg
cgacgaggaaaggcaggcgctcctccgtatttcgcacatatgcggatctgctccgcgggg
cgggcgcgcgatgtgctcctcgggctggactcgcacatcgatacatcggccgaagggggt
atcaccgtggtcgactaccggcgcgcgccgattgccgaggtcttttttgcgtgcgagccg
ggcgacgagtacgaaatcgaggtaaacggccgcaccgtgaccgggatcctcgagcggcgc
catttggtcaccttcgaagaggacgaaccttcggccatcaccgtccccaacggagccttg
cggcaggtggacggcacctggcgcttcgaaaccggcgtgctcctgcccaccttttcgcgc
gcgccggggcagccgctggccgtcgatctgttcggccgcggtccggattttcagcgcaac
atggccgcgctcttgagctccgaccagacggcgctcctcgagcgcgatcccaatgagacg
gtgctggtgctgggcgcggccggctcggggaagacgacggtcgccatccaccgggtggcg
agcatcgcgcgcgcgcgcaaaggcgacttcgacccgaagaaggcgctcgtgatcgtgccc
gaggcggggctccgccacctggcggagcggatgctgcgcgatctggggctcgacgcggtg
gccgtgcgcaccttcgacgattggatccgcgcggaggcgcgccgcatctttccatggctg
cccgcccgcgaagcgccggagaccccgctcggcgcgcgccggatcaagcgccaccccgcc
cttttttcggccatcgacgcgctcctggaccagcgcacccgggagctcgcggcccgcatc
gaccgcgtgcacgcgggccggggggcgattcagcgcgccctcgaagcgcgccgtgagccc
atcctggagaaaaggctcgagcgcggcgcggtggaggtgctcgcggcggccagccccaag
caacgtccgctcctcgaagaggcctttcgcgaagagcttcgaaagctcgaggacgtgcgc
gaggatctctacgcgctggtcggcgatcgcgcgctgctcgcgcacgccgttcgcgattcg
ggcggcgatctcacgcgcgcgggggtcgagcaaacggcggagcacacgcggcggcagctc
gatgagccgagcgaaattcgatttgcccatgtggacgccgatcggctggtgaccctcgac
gggcgctcgctcgacgatggcacccccgacgcggtggccggaacggtggacatcgaggac
tacgccgttctgttcgagctcctctggcgaaagacggggcgtacgcagacgcgcgcgggc
aagctgcggcgcgcgcgccacctggtggtcgacgaggcgcagagcctgacctcgatcgag
ctgcgggtgctcggacatgccctgcacggcaacgcgaccatcgccggagacgaggcgcaa
gtcatcgatggtgacggttatttcacgtcgtgggacgataccctctccgcattgggcgtg
cgcaccacggcgagctacttgaagacgtcgtaccgctgtccgcggcccattctggacgcg
gcgtacgcgatcctgggccccgaggcggccgccgccaagcccgcggccgtgcgggacggc
ggccccgtcttgcacacggtgctgccgaacgaaggccacgccgcggtgttcgtggccgag
gcgctgcgcggcctcgcgcgcaccgagccgcgcgcgatggtggcggtcatcgcgcacgac
gcggccacggcgcgggccgttcacgacgtggtggcgcgcgccctgcccgcccggctcgtc
ctcgatggcgattttgcctttgcgccgggggtggagatcaccgaggtggcgcaggtcaaa
gggctggagttcgattacgtgatcgtgccggacgcgaatgccccgagctatccagatacc
ccgctgcaccggcgcatgctgcatgttgcgctgacgcgtgccatccaccaggtgtggatc
ctttcgccgggtgaaccttcgcggtgcctcgccggcggtacgtga
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