Pendulispora albinea: LZC94_18655
Help
Entry
LZC94_18655 CDS
T10974
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
palj Pendulispora albinea
Pathway
palj03030
DNA replication
palj03430
Mismatch repair
palj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LZC94_18655 (dnaE)
03430 Mismatch repair
LZC94_18655 (dnaE)
03440 Homologous recombination
LZC94_18655 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palj03032
]
LZC94_18655 (dnaE)
03400 DNA repair and recombination proteins [BR:
palj03400
]
LZC94_18655 (dnaE)
Enzymes [BR:
palj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LZC94_18655 (dnaE)
DNA replication proteins [BR:
palj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LZC94_18655 (dnaE)
DNA repair and recombination proteins [BR:
palj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LZC94_18655 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF6282
Motif
Other DBs
NCBI-ProteinID:
WXB19242
UniProt:
A0ABZ2M9S3
LinkDB
All DBs
Position
4745234..4748878
Genome browser
AA seq
1214 aa
AA seq
DB search
MADEFVHLHVHTQYSMLDGAVKVKDLVKRVVGAGMKAVAVTDHANMFGAISFYKAAKEAG
VAAILGCEIDVTDGRHSRHLPLLAASPEGYKNLVWLVSRGHVDPDPAGPPGHTCVRLSDI
ADHSKGLIALTGCMGGLVPQRVLEEGPAAGLESLAKLRDIFEPGSLFVELQDHGLIEQPV
LNEIMIENARKLDLPLVATNDVHYASRDDAEAHLYLSCIKSGRSYAEAKERHHGSSEMYL
KSPAEMAAQFSAWPEAIRNTLQIAERAAIKLKLGEPMLPSFQVPEGFDTEGYFRHVAREG
LGTRFRELEALGKTPDREAYRARLELELDVISKMKFPGYFLIVWDFIRYAKENGIPVGPG
RGSGAGSIVAYAMRITDLDPIPYNLLFERFLNPERVSMPDFDVDFCMDRRDQVIAYVQKR
YGETSVGQIATFAELKAKSVIKDVARAMAITPIEAQALANLIPRKSPAETYTIAESLEVE
PKLKARYETEATTKELVDQSRKLEGLTRHAGKHAAGIVISEGPLWDHVPVFRDEKTGAYV
TQYYKDDVEQAGLVKFDFLGLKTLTVIDIATKLINARPDIKRQNKVFDPSTVPLDDKATY
ALLGSGETKGVFQLESSGMQQLFKDLKADSFEDIVAAVALYRPGPLGTGMVQDFVNRKHG
RAPIGTMHELVDELLKPTYGVIVYQEQVMQIAQALAGYSLGGADLLRRAMGKKKPEEMAK
QKGIFVEGALKKGVLQEDAERIFGLLEYFAGYGFNKSHSAAYALITYQTAYLKAHYPAEL
LCAIMTSDKERIEKVVRTIADARSLDVTVLSPDINESDTDFKVVYTHPEGNKKLSSRDKV
RDPLGPQIRFGLGAVRGVGGAALETLFEARAAGGPFADLFDFGARVDAKKINRSVLEALV
QCGAFDTSLKTLGISRARAFASIDIALERSRAASRDRERGQTNLFGLFDAAPRAATNGSN
GHGTARSSQSAGDYVDAAAWDQKEMLVRERQSLGFYVSGHPVERYLRDKAAYGRHELNLC
ADCAGMDDWAKVRLCGMVEGYREKILRDKNGGKPSAGAAKIAFFELEDPSGRVNVKVRGR
EIESYAQLLTGGEPLVVTGKVSFPRRDDDAPEEDDDANREPTIFLNEVEPLSKVVSSHTE
RMTIRLRAERTRPSDLDEMKRLFTESQGACPVTVVLTLPDGAEAVLSLRDYRVDVSDPLL
SGLERVFGEQVAEI
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgagtttgttcaccttcacgtccacacccagtactcgatgctggacggcgcc
gtgaaggtgaaagacctggtaaagcgcgtggttggggcggggatgaaggccgtggccgtc
accgaccacgccaacatgttcggcgcgatttccttttacaaggcggccaaggaggcgggg
gtcgccgccatcctggggtgtgagatcgatgtcaccgacgggcgccacagccggcacctg
ccgctcttggcggcctcgcccgaggggtacaagaacctggtctggctcgtctcgcgcggc
catgtcgatcccgatccggccggcccccccgggcacacgtgcgttcgcctctcggacatc
gccgatcactcgaaggggctgatcgcgctcaccggctgcatgggcggcctggtcccgcag
cgggtcctcgaagaggggccggcggccggcctcgagtccctggccaagctgcgcgacatc
ttcgagccggggagcctgttcgtggagctgcaggatcacggtttgatcgagcagcccgtt
ctcaacgaaatcatgattgagaacgcgcgcaagctcgacctgccgctggtggccaccaac
gacgtccactacgcctcgcgcgacgacgccgaggcgcacctctatctctcgtgcatcaag
tcggggcgctcgtacgcggaggccaaggagcgccaccacggctcgagcgagatgtacctg
aagtcgccggccgagatggccgcgcagttctccgcctggccggaggccatccgcaacacc
ttgcagatcgcggagcgggcggccatcaagttgaagctcggcgagccgatgctcccgagc
ttccaggtgcccgagggcttcgacaccgagggctacttccgccacgtggcccgcgagggg
ctggggacgcgcttccgcgagctcgaagccctgggcaagacgcccgatcgcgaggcctat
cgggcgcgcctcgagctcgagctggacgtcatcagcaagatgaagttcccgggctacttc
ctcatcgtctgggacttcatccgctacgccaaggagaacggcatcccggttgggcctggc
cgcggctcgggcgcggggtcgatcgtggcctacgccatgcgcatcaccgacctcgatccc
atcccgtacaacctgctgttcgagcgcttcctgaaccccgagcgcgtcagcatgcccgac
ttcgacgtcgacttctgcatggaccggcgcgaccaggtcatcgcctacgtgcagaagcgc
tacggcgagaccagcgtgggccagatcgcgacgttcgccgagctcaaggccaagagcgtc
atcaaggacgtggcgcgcgccatggccatcacgcccatcgaggcgcaggccctggccaac
ctgatcccgcgcaaatccccggccgagacgtacaccatcgccgagagcctcgaggtcgag
cccaagctcaaagcgcgctacgagacggaggccaccaccaaagagctggtcgaccagtcg
cgcaagctcgagggcctcacgcggcacgcgggcaagcacgcggcgggcatcgtcatcagc
gagggcccgctctgggaccacgtgccggtcttccgcgacgagaagacgggcgcctatgtc
acgcagtattacaaggacgacgtcgagcaggcgggcctggtcaagttcgacttcctcggc
ctcaagaccctcaccgtcatcgacatcgccacgaagctgatcaacgcgcgcccggacatc
aagcggcagaacaaggtgttcgatccgtccaccgtgcccctcgacgacaaggccacctac
gcgctcttgggatcgggcgaaaccaagggcgtgttccagctcgagtcgagcggcatgcag
cagctcttcaaggacctcaaggccgactcgttcgaagacatcgtcgccgccgtggccctc
taccgtcccggtccgctcggcacgggcatggtgcaggacttcgtcaaccgcaagcacggc
cgcgcccccatcgggaccatgcacgagctggtcgacgagctgctcaagccgacctacggc
gtcatcgtctaccaggagcaggtcatgcagatcgcgcaggcgctggcgggctacagcctc
ggcggcgccgacctgctccgccgcgccatgggcaagaagaagcccgaggagatggccaag
caaaagggcatcttcgtcgagggcgcgctgaaaaagggcgttctgcaggaggacgccgag
cgcatcttcgggctgctcgagtacttcgcgggctacggcttcaacaagtcgcacagcgcg
gcctacgcgctcatcacgtaccaaacggcttacctgaaagcgcattacccggccgagctc
ctttgcgcgatcatgaccagcgacaaagagcgcatcgagaaggtggtgcgcaccatcgcc
gacgcgcgctccttggacgtgaccgttctgtcgcccgacatcaacgagagcgacaccgac
ttcaaggtcgtctacacgcaccccgaggggaacaaaaagctctcgtcgcgcgacaaggtc
cgcgatccgctggggccgcagatccgcttcgggctgggcgcggtgcgcggggtcggcggc
gccgcgctggagaccttgttcgaggcgcgcgcggccggcggtcccttcgccgacctgttc
gacttcggcgcccgggtcgacgcgaagaagatcaaccgcagcgtgctcgaggcgctggtg
cagtgcggggcgttcgacacctccctcaagaccttgggcatctcccgggcccgcgccttt
gcctccatcgacatcgcgctggagcgttcgcgcgccgccagccgcgatcgcgagcggggc
cagacgaacctcttcggcctcttcgacgcggcgccgcgcgcggccaccaacggctccaac
gggcacggcaccgcgcgctcctcgcagagcgcgggcgactacgtggacgcggccgcgtgg
gaccagaaggaaatgctggtccgcgagcgccaatccttgggcttctacgtgtcggggcac
ccggtcgagcgctatttgcgcgacaaggcggcctacgggcgccacgagctcaatctctgc
gccgactgcgccggcatggatgactgggccaaggtgcgcctctgcggcatggtcgagggc
taccgcgagaagatcttgcgcgacaaaaacggcggcaagccctcggcgggtgccgccaaa
atcgccttcttcgagctggaagacccctcgggccgggtcaatgtcaaggtgcgcggccgc
gagatcgagtcctacgcgcagctcctcaccggcggcgagcccttggtcgtcaccggcaag
gtgagcttcccgcgccgcgacgacgacgcccccgaggaagacgacgacgccaaccgcgag
ccgaccatcttcctcaacgaggtcgagcccctctccaaggtcgtgtcgagccacaccgag
cgcatgaccatccgcctgcgcgccgagcgcacccggccctccgacctcgacgaaatgaag
cgcctcttcaccgaaagccaaggcgcgtgccccgtcaccgtcgttctaaccctccccgac
ggcgccgaagccgtcctctccctccgcgactaccgggtcgacgtgagcgatccgctgctg
tcggggttggagcgggtttttggcgagcaggtcgcggagatttag
DBGET
integrated database retrieval system
