KEGG   Pendulispora albinea: LZC94_22990
Entry
LZC94_22990       CDS       T10974                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
palj  Pendulispora albinea
Pathway
palj02020  Two-component system
Brite
KEGG Orthology (KO) [BR:palj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LZC94_22990
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:palj02022]
    LZC94_22990
Two-component system [BR:palj02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   LZC94_22990
SSDB
Motif
Pfam: Sigma54_activat AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 HTH_30 Mg_chelatase AAA_2 bpMoxR AAA HTH_50 DUF7984 HTH_23 MCM AAA_16
Other DBs
NCBI-ProteinID: WXB20076
UniProt: A0ABZ2MC53
LinkDB
Position
5975987..5977399
AA seq 470 aa
MSEDSRYDWGGSRGARRGHVGLISRSADLLERVESVAAQCGTVVNVASDVASARELLIAP
DYAVKIVDRVSLGLLPGAACAGCAVLDTVFREATISLLVGPRAGDDAGTIQRYAPTELEP
LVHEVRSILLRNEGAKTLELEIVGTSASIRAVREQIELVAPYREISVMLLGETGTGKELV
AQAIHRLGAPPGAPFVAINCAAVPESLFESELFGHEAGAYTGARGARVGLLEAAGQGVVF
LDEVGDMPLALQSKLLRVLETRTFRRVGGTRDLPLQARVVSATNADLELVLRPDLLYRLA
GFTIPLPTLRERGDDIALLACVFLKRFSERHRLSVKRFSEAALARLRAHPWPGNVRELRG
AVEHAAILSTGPYLEDAHVALAIAPFLRRERLPPAAGSGAYPAAYPAVVASVAARLGESS
LERPRLRDLERDMILRAYEDANHKLSGAARSLGIPRSTLRDKLRRFGVLT
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgtcagaggatagccgctatgattggggcgggtcgcgcggagctcgtcgcgggcacgtc
ggattgatctcgcgctcggcggatctgctcgagcgcgtcgagtcggtggcggcgcagtgc
gggaccgtggtgaacgtggcctcggacgtggcgtcggcgcgcgagctgctcatcgcgccc
gactacgccgtcaagatcgtcgaccgcgtctcgctgggtcttttgccgggggccgcgtgc
gccggatgcgccgtgctcgataccgtctttcgtgaggcgacgatctcgttgctcgtgggc
ccgcgggccggagacgacgccggcaccattcaacgttacgcaccgacggagctggagccg
ctcgtccacgaggtgcgatcgatcctcttgcgcaacgagggagccaagacgctcgagctg
gagatcgtgggcacgtcggcgtcgattcgagccgtgcgcgagcagatcgagctcgtcgcg
ccgtaccgcgagatctcggtcatgttgctcggggagacgggcaccggcaaagagctcgtc
gcccaagcgatccaccggctcggcgccccgccgggcgcgccgttcgtggcgatcaactgc
gccgcggtgccggagagcctcttcgaaagcgaactgttcgggcacgaggcgggcgcctat
accggcgcgcgcggagcacgggtcgggctgttggaagcagccggtcaaggtgtcgtattt
ctcgacgaggtcggcgatatgcccctcgcgttgcagagcaagctgcttcgcgtgctggag
acgcgaacattccgtcgggtgggagggacgcgcgacttgccgctccaggcgcgcgtcgtc
tcggccaccaacgccgacttggagctcgtgctccgccccgatctgctctatcggctcgcc
ggcttcaccataccgctgccgaccctgcgcgagcgcggcgacgacatcgcgctgctcgcg
tgcgtgttcctcaagcgattctccgagcggcaccgtttgtcggtgaagcgattctccgag
gcggcgctcgcccggctgcgcgcccacccttggccgggcaacgtgcgcgagctgcgcggc
gcggtcgaacacgccgccatcctgtccacgggcccctacctcgaggacgcgcacgtggcc
ctggccatcgcgccattcctgcgccgggagcgtctcccgccggcggcaggctccggcgcc
taccctgccgcctatcctgccgtggtggcctccgtcgcggcccgtctgggcgagagctcc
ctcgagcgcccgcggctgcgcgatctcgagcgcgacatgatcctccgcgcgtacgaggac
gcgaaccacaaattgagcggcgccgcgcgctcgctcggcatcccgcgctccacccttcgc
gacaagctccgtcgcttcggggtgctcacgtga

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