Pendulispora albinea: LZC94_27555
Help
Entry
LZC94_27555 CDS
T10974
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
palj Pendulispora albinea
Brite
KEGG Orthology (KO) [BR:
palj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palj03019
]
LZC94_27555 (hrpB)
Enzymes [BR:
palj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LZC94_27555 (hrpB)
Messenger RNA biogenesis [BR:
palj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LZC94_27555 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
OB_NTP_bind
AAA_22
Cas3-like_C_2
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
WXB11606
LinkDB
All DBs
Position
7104363..7106912
Genome browser
AA seq
849 aa
AA seq
DB search
MHPLPIDPLLPEIVRRLERAPNLVLEAPPGAGKTTRVPRALLEHGAAKEANGEGARGEII
VLEPRRLAARLSARRVAEEIGEAPGETVGYQVRFEDVTGPKTRLRFVTEAILTRRLLGDP
QLKGVHAVVLDEFHERHIHGDVALACLRHLQRTSRPDLRIVVMSATLDAEPAARFLGCDS
LRSEGRRFDVRIEHATKEDERPLELQVASAVRTVMSLPEPGDVLVFLPGAREIRRAQEAL
EKLAAERDLLVLPLHGDLSPAEQDRAIRPAERHKVILATNVAESSVTIDGVVAVVDSGLA
RVMGHDPWSGLPRLRVEKVSRASATQRAGRAGRTRPGVCVRLYTKMDFERRPEHQPPEIA
RLDLTELLLELRAQKIDRALEWLDPPPPVSLAAAEELLVRLGALETEASSAGEVTAIGRR
MLRYPLHPRIGRLLVEAEDRGVFDDATVLAALLAERDIRASARAQFGGGRGGRPGDVATE
DSDLLQMRDLFREAQDARFTPHVLRAIGLDAGPTFAVDRAHKQLRRIGRLRDRDRGDDTE
LRKCLLTGYPDRVARRVRGRTLAMAGGGRAELAESSAVRDAPWLLALDGDESRRDVGTIR
IASAIEPEWLIEFYADRIVESTRTTFVRTSQRVESISSMTYDGLVLDESPAAGTARADDA
EAAALLAEAVLADGIAGLAAFAPEGALEEWVLRARFARTVDPSIPLVDDAFLRAVFLEHC
MGRRSFAELREASFLDAVQARLGSVFTARIFALAPERITLARGRSVKIRYEAEKTPHIAS
RLQDFFGMKETPKVGGGKVPLVVHLLAPNQRAVQVTSDLEGFWERHYPALRKQLSRRYPK
HAWPERPES
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
gtgcacccgctccccatcgatccgctgcttcccgagatcgtccgccggctcgagagggcg
cccaacctcgtcctggaggcgccgcccggggcgggcaagaccacgcgcgtgccgcgtgcg
ctgctcgagcatggtgcggccaaggaggccaacggcgagggcgcacgcggcgagatcatc
gtcctcgagccccgccggttggccgcgcgcctctccgcgcggcgggtggcggaggagatc
ggcgaggcgcccggcgagacggtgggctaccaagttcggttcgaggacgtgaccgggccc
aagacgcgccttcgcttcgtcaccgaggcgatcctcacgcggcgcctgctcggcgatccg
cagttgaagggcgtgcacgcggtggtgctcgacgagttccacgagcggcatatccacggc
gacgtcgccctcgcgtgcctccgccacttgcagcgcacatcgcgcccggatctgcgcatc
gtcgtgatgtcggcgaccctcgacgcggagcccgcggcgcgcttcctcggctgcgactcg
ctgcgctcggaggggcggcgcttcgatgttcgcatcgagcatgcaaccaaggaggacgag
cggccattggagctgcaggtggcctccgcggtgcgtaccgtcatgtccctccccgagccg
ggcgacgtgctcgtgttcttgccgggcgcgcgggagatccggcgcgcgcaggaggccctc
gaaaaattggcggcggagcgggatctgctggtcctgccgctgcacggcgatctctcgccc
gccgagcaggatcgggcgatccgcccggcggagcggcacaaggtgatcctcgccaccaat
gtggccgagtcgtcggtcaccatcgatggcgtggtcgccgtcgtcgacagcggccttgcg
cgcgtgatggggcacgatccctggtccggcctcccgcgcctccgggtcgaaaaggtgagc
cgcgcttcggccacgcaacgcgcggggcgcgcgggaagaacgcgtccgggggtgtgcgtt
cgcctttatacgaagatggacttcgaacggcgccccgagcatcagccgcccgaaatcgcg
cggctcgatctgacggagctcttgctcgagctgcgggcgcaaaagatcgaccgcgcgctc
gagtggctcgatccgcccccgcccgtgtcgctcgcggcggccgaggagctgctcgtccgc
ctgggcgccctcgagaccgaggcttcgagcgcaggcgaggtgaccgccatcggtcgccgc
atgctgcgctaccccttgcacccgcgcatcgggcgcctcttggtggaggccgaagaccgc
ggcgtcttcgacgacgccaccgtgctcgccgcgctgttggccgagcgcgacatccgcgcc
agcgcacgggcgcaattcggcggcgggcgcggcggccgcccgggcgatgtggccaccgag
gactcggatctcctgcagatgcgcgatctctttcgcgaggcgcaggatgcgcggtttacg
ccccatgtgctccgcgccatcgggctcgatgcgggccccaccttcgccgtcgatcgcgcc
cacaagcagctgcgccgcatcggccgcctgcgcgatcgcgatcggggcgacgataccgaa
ttacggaagtgcttgctgacggggtatcccgaccgggtggcgcggagggtgcgcggccga
acgctcgccatggccggcggcgggcgcgcggagctcgccgagagcagcgcggtgcgcgat
gcaccgtggctcctggcgctcgacggcgatgaatcgcgccgcgatgtcggcaccattcgg
atagccagcgcgatcgagcccgagtggctcatcgagttttacgcggaccgcatcgtggag
agcacgcgcacgaccttcgtgcgcacatcgcagcgcgtcgagtccatcagctcgatgacc
tacgatgggctggtgctcgatgagtccccggcggccggcaccgcgcgcgccgatgatgcc
gaggccgcggcgcttttggccgaggcggttctggcggacgggatcgcggggctcgcggcg
tttgcaccggagggcgccctggaagagtgggttttgcgcgcgcgcttcgcccgcacggta
gacccctcgataccgctcgtggacgacgcgtttttgcgcgcggtgttcctcgagcactgc
atgggtcgccggagctttgccgagcttcgcgaagcctcgtttctcgatgcggtccaagcg
cgcctcggttccgttttcactgcacgcatcttcgcgctggcaccggagcgcatcacgctc
gcgcgcggacgcagcgtaaaaattcgttacgaggcggaaaagaccccacatatcgcgtct
cgtctgcaggacttcttcggcatgaaggaaacgccaaaggtaggtggcggcaaggtgccg
ctcgtggttcatcttctcgctcccaaccaacgcgcggttcaggttacaagcgatctcgag
ggtttctgggagcgacactatcctgcacttcgcaagcagctttctcggaggtacccgaag
cacgcttggcccgaaaggcccgagagctga
DBGET
integrated database retrieval system
