KEGG   Pendulispora albinea: LZC94_35315
Entry
LZC94_35315       CDS       T10974                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
palj  Pendulispora albinea
Pathway
palj03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:palj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LZC94_35315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:palj03400]
    LZC94_35315
Enzymes [BR:palj01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LZC94_35315
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LZC94_35315
DNA repair and recombination proteins [BR:palj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LZC94_35315
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS NFACT_N zf_CopZ Ribosomal_S13 Zn_ribbon_TFIIB RNHCP Zn_Ribbon_TF DUF5795
Other DBs
NCBI-ProteinID: WXB13103
LinkDB
Position
complement(9051044..9051958)
AA seq 304 aa
MPELPDVTVYVEAIAARIVGEPLLKIRLASPFVLRTVAPPPARFEGQLVTAIRRVGKRIV
LVVGAGEPQLFVVIHLMVAGRFRYVAAGAKVPAKVGLAAFDFPKGTLVLTEVSKKKRASI
HLVEGEAALRALDRGGIEVLSAKLPAFKKALTGENHTLKRSLTDPRLFSGIGNAYSDEIL
HRAGLSPVRLTSQLSDEEIARLFEATKSTLVEWTDRLREETGDKFPEKVTAFREEMAVHG
RYGKPCPVCGGNVQRIVYAENETNYCPRCQTGGKLLMDRSLSRLLKDDWPKTIDELEERR
GARE
NT seq 915 nt   +upstreamnt  +downstreamnt
gtgcctgagctccccgacgtcaccgtttatgtcgaagcgatcgccgcgcgcatcgtcggc
gagccgctcctcaagatccgcctcgcgagccccttcgtccttcgcaccgtagcgccgccg
ccggcgcgcttcgaaggccagctcgtcaccgccatccggcgcgttggaaagcgcatcgtg
ctggtggtcggcgcgggcgagccgcagctcttcgtggtcattcacttgatggtcgcgggg
cgttttcgctacgtggcggcgggcgccaaggtcccggccaaggtgggcctggcggccttc
gactttccgaagggcaccttggtgctcacggaggtctccaagaagaagcgggcctccatc
cacctcgtcgagggcgaggcggcgctccgcgcgctcgatcgcggcggcatcgaggtgctc
tccgccaagctccccgccttcaaaaaagcgctcaccggcgagaaccatacgctcaagcgc
tccctcaccgatccgcgcctcttcagcggcatcggcaacgcctactcggacgagatcctc
catcgcgcgggcctctcgcccgtgcgcttgacgtcgcagctctcggacgaggagatcgcg
cgtctcttcgaggccaccaagtcgaccttggtcgagtggaccgatcgcctccgcgaggaa
accggcgacaaatttccggagaaggtcaccgcgttccgcgaagaaatggccgtgcacggc
cgctacggcaagccgtgccccgtgtgcggcggcaatgtccagcgcatcgtctacgccgag
aacgagaccaactactgcccccgctgccaaaccggcggcaagctgctgatggatcgctcg
ctctcgcgccttctgaaagacgattggcccaagacgatcgacgagctcgaggagcgccgc
ggcgcgcgggagtga

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