KEGG   Pendulispora albinea: LZC94_40525
Entry
LZC94_40525       CDS       T10974                                 
Name
(GenBank) sigma 54-interacting transcriptional regulator
  KO
K07714  two-component system, NtrC family, response regulator AtoC
Organism
palj  Pendulispora albinea
Pathway
palj02020  Two-component system
Brite
KEGG Orthology (KO) [BR:palj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LZC94_40525
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:palj02022]
    LZC94_40525
Two-component system [BR:palj02022]
 NtrC family
  AtoS-AtoC (cPHB biosynthesis)
   LZC94_40525
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 Yop-YscD_cpl AAA_5 FHA HTH_30 AAA Mg_chelatase AAA_22 AAA_16 AAA_2 AAA_19 nSTAND3 HTH_28 MCM AAA_3 AAA_14 IstB_IS21 AAA_7 TsaE RsgA_GTPase Zeta_toxin
Other DBs
NCBI-ProteinID: WXB14104
LinkDB
Position
10372484..10374205
AA seq 573 aa
MVVDHRVRMVGRARDADLILPDRSVSRHHFQIVETEHGTRVHVCPTAAPLVHAGCETLDV
LVKVGDSLVVGNTVLLVAEADTDGSQPPASYGSTMVHALLNGPAADARGFAAVFALNEAL
ATTEDMGSLESALANWARAHADCESIEITDAPSNVLSGANDTVTNGASNGDAMAVLETVT
PAGRVKLVVPAHGASPRWIAFATTLSPDRVTDLLRRLLVVAVQICASRIAQISALRTVKA
ELETFRQQAVGSAHAFLGTSVAADRLVRIIPKLAVSDTVVLLTGETGVGKTFVARLIHET
GSRKDEPLKVINCAAIPDNLIESELFGHERGAFTGAVAARPGALESAGRGTVLLDEIGEL
PLASQAKLLRVLEEKCFERVGSNRSVTLQARVIAATNRDLQAMVTAGTFRSDLFFRISVV
SASVPPLRERGDDLLLLAQQILLDFAPSTGRRIDGFSPEALAAIRRYPWPGNVRELRNAI
EHAVVLGDGPWIAPSDLPVAVNGVHEPSVNGASAQAAGEDPFIVRLPASLEWVERRAIDA
ALLQTNGNRTKAAALLGINRQTLYNKLREVPRS
NT seq 1722 nt   +upstreamnt  +downstreamnt
atggtcgtcgaccatcgcgtgcggatggtcggtcgcgcgcgcgacgccgacttgatcttg
cccgatcgctccgtttcccgtcaccacttccagatcgtggagaccgagcacggaacgcgc
gtccacgtgtgccccaccgccgccccgctcgtgcacgccgggtgcgaaacgctcgacgtg
ctggtgaaggtcggggactcgctcgtagtaggcaacaccgtgctcttggtggccgaagcc
gacaccgacggctcgcaaccgcccgcgtcctacggctccacgatggtacacgcgctgctg
aacggcccagccgccgacgcgcgcggcttcgcagccgtgtttgcgctcaacgaagcgctg
gccacgacggaagacatgggctcgctcgaatcagcgctcgccaactgggcgcgcgcgcac
gccgactgcgaatccatcgaaatcacggacgcgccctccaacgtgctctcgggcgcgaac
gataccgtgaccaatggcgcgagcaacggcgatgccatggcggttctggagacggtcacc
cccgcgggccgtgtaaagctcgtggtgcccgcgcatggagcatcgccgcgatggattgcg
ttcgcgaccacgttgtcccccgatcgggtgacggatctccttcgccggctgctggtggtg
gccgttcaaatctgcgcctcgcgcatcgcgcaaatctcggccctgcgcacggtcaaagcg
gagctggagacatttcggcagcaagccgtcgggagcgcgcacgccttcttgggaacatcg
gtggcggccgatcggctggtgcgcatcatcccgaagctcgccgtgtcggacaccgtggtg
ctcctcaccggcgagacaggggtgggcaaaaccttcgtggcgcgcttgatccacgaaacc
ggttcacgcaaagacgagccgctcaaggtcatcaattgtgcggccattccagacaacctc
attgagagtgagttgttcgggcacgagcgcggcgcgttcaccggtgccgtggccgcgcga
cccggtgcgctcgagagcgcaggccggggcaccgtgctgctcgacgaaattggcgagctg
ccgctcgcgagccaagcgaagctcctacgcgtcctcgaggagaagtgcttcgagcgggtc
ggctcgaaccgctccgtgaccttgcaggcccgcgtcatcgccgccaccaaccgcgatctc
caggccatggtgaccgcgggcacctttcgaagcgatctgttctttcgcatctcggtcgtc
agcgcctccgtgccaccgctgcgcgaacgcggtgacgacttgttgttgctcgcgcaacaa
atcttgctcgatttcgcccccagcaccggccggcgcatcgatggcttttcgcccgaggcg
ctggccgccattcgccgctacccttggcctgggaatgtgcgggagctgcgcaatgccatc
gagcacgcggtggtcctgggcgatggcccgtggattgcgccctcggatcttcccgtggcc
gtgaacggtgttcacgaaccttccgtgaacggggcgtcggcgcaagcggcgggcgaagat
ccgttcatcgtgcgcctgccggcgagcctcgagtgggtggagcggcgggccatcgatgcg
gcgctgttgcaaacgaacggcaatcgaacgaaggcggcggcgttgctcgggatcaatcgg
caaaccttgtacaacaagctgcgggaagtcccgcgcagctga

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