Pseudomonas alkylphenolica: PSAKL28_00110
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Entry
PSAKL28_00110 CDS
T03238
Name
(GenBank) recombination protein F RecF
KO
K03629
DNA replication and repair protein RecF
Organism
palk
Pseudomonas alkylphenolica
Pathway
palk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSAKL28_00110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palk03400
]
PSAKL28_00110
DNA repair and recombination proteins [BR:
palk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSAKL28_00110
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_16
AAA_15
AAA_13
AAA_29
AAA_27
Aq_aa27
Motif
Other DBs
NCBI-ProteinID:
AIL59249
UniProt:
A0A077F5M9
LinkDB
All DBs
Position
12068..13171
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AA seq
367 aa
AA seq
DB search
MSLSRVSVTAVRNLHPVTFSPSPRINILYGANGSGKTSVLEAVHLLGLARSFRSTRLTPV
IQYEQLACTVFGQVELSEGGSSNLGISRDRQGEFTIRIDGQNARSAAQLAEILPLQLINP
DSFRLLEGAPKIRRQFLDWGVFHVEPRFMATWQRLQKALRQRNSWLRHGTLDAVSQAAWD
RELCLASAEIDEYRRNYIKALKPVFEQTLSDLVELEGLTLSYYRGWDKDRELSEVLASSL
QRDQHMGHTQAGPQRADLRLRLGVHNAADILSRGQQKLVVCALRIAQGHLVSQARRGQCI
YLVDDLPSELDEQHRRALCRLLEDLRCQVFITCVDHELLREGWQTETPVALFHVEQGRIT
QTHDHRE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcagtcgcgtttctgtcaccgcggtgcgtaacctgcacccggtgacattctcc
ccctccccccgcatcaatatcctgtacggcgccaacggcagcggcaaaaccagcgtgttg
gaagccgttcatctgctcggcctggcccgttcctttcgcagcactcgtctgacgccagtc
atccagtatgagcagctggcctgtacggtctttggccaggttgaattgagcgaaggtggt
tcgagcaacctgggtatttcgcgggatcggcaaggcgagttcactattcgcatcgacggg
cagaacgcccgcagcgctgctcagctggcagagattctgccactgcaattgatcaacccg
gacagctttcgcttgctcgaaggtgcgccgaaaattcgccggcagttccttgattggggt
gtgttccacgtggaaccacgcttcatggccacatggcaacgcctgcagaaggctttgcgg
cagcggaactcatggttgcggcatggtacacttgacgctgtttcgcaagcggcctgggac
cgggagctgtgcctggccagtgctgaaatagatgaataccgccgaaattacatcaaggcc
ttgaagcccgtctttgagcaaaccctgagcgatttggtcgagctcgaagggctgaccctg
agttattaccgtggctgggacaaggatcgagaactcagtgaagtgctcgcctcttccttg
caacgagatcagcacatgggccacacccaggccggaccacaacgcgctgatttgcgcctg
agactcggcgttcataacgccgccgacattttgtctcggggccagcagaaacttgtggtc
tgtgcgttgcgtatcgcccagggacatttggtcagccaggctcggcgtggccaatgtatt
tatctagtggatgacttgccatccgagttggatgagcagcaccgtcgcgcactttgccgc
ttgttggaagacttacgctgccaggtatttatcacctgtgtagatcacgaattattgagg
gaaggctggcagacggaaacgccagttgctttgttccacgtggaacagggccgtatcacc
cagacccacgaccatcgggagtga
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