Pseudomonas alkylphenolica: PSAKL28_06270
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Entry
PSAKL28_06270 CDS
T03238
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
palk
Pseudomonas alkylphenolica
Brite
KEGG Orthology (KO) [BR:
palk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palk03000
]
PSAKL28_06270
Transcription factors [BR:
palk03000
]
Prokaryotic type
Helix-turn-helix
Other families
PSAKL28_06270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
PAS_4
AAA_5
PAS_9
AAA_2
HTH_50
HTH_23
HTH_AraC
PAS_8
HTH_7
HTH_22
HVO_A0261_N
HTH_17
RWP-RK
HTH_30
AAA
HTH_20
dnstrm_HI1420
AAA_19
TIP39
Mga
nSTAND3
AAA_16
PAS_7
Motif
Other DBs
NCBI-ProteinID:
AIL59861
UniProt:
A0A077F8W7
LinkDB
All DBs
Position
683995..685932
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AA seq
645 aa
AA seq
DB search
MQNNHLSRHARQVLTVTQGKAQMHGPGSDPSIARSWLRCLEDYHLDPAQSIAPTVLEHGR
VLESRERLQQVLQIAGNEMNSLHQQLSGAGHAVLLTDARGVILNCVTAPTERRVFERAGL
WLGADWSEAREGTNGIGTCLVERQALTIHQDEHFRGRHTGLTCSASPVFDPHGELLAVLD
VSSARPDVSRQSQFHTMALVNLSAKMIESCYFLRYFENQWLLRFHLQAESVGLFSEGLLA
FDGDGRICAVNQSALNLLGTIRGGALGKPVEMFFDCALDELFSRATTHASASWPLRTRDG
RLLFASLRGQVRQPVQPSLPTPAPAAKVEKTGSICLLDPALQNDFRRAVRVFERDVPLLI
NGETGSGKEAFAKAVHQASQRRDRAFVALNCASIPESLIESELFGYRGGSFTGARKEGMR
GKLQQADGGTLLLDEIGDMPLALQTRLLRVLEDRMVVPIGGEPQAVNVRIISATHRNLLE
RVEDGSFREDLYYRLNGLEIELPALRERSDKSQLLDFILAEEAGEQSVTLEPSARQALLD
FAWPGNVRQLRNVLRTLVALCDEGAISFRDLPSIVGAGLPRDSGLSEPTPRGASPLPPLE
DAERSALLAALEQQRWHMTHVAAQLGVSRNTLYRKLRKHGIARSL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaacaatcacctcagccggcacgcccggcaagtgctcacggtgactcagggcaag
gcacagatgcacgggccgggcagcgacccttcgattgcccgctcatggttgcgctgcctg
gaggattaccacctggacccggcccagagcatcgcgccgactgtgcttgagcatggccgc
gtgctggagagccgcgagcgtctgcaacaggtgctgcagattgccggcaatgagatgaac
agcctgcaccagcagttgtccggcgccgggcacgcggtgttgctgaccgatgcccgtggg
gtgatcctcaattgcgtcaccgcaccgaccgaacggcgggtgttcgagcgtgcgggactg
tggctgggcgccgactggagcgaggcccgcgagggcaccaacggtatcggcacatgcctg
gtcgagcggcaggcgctgaccatccatcaagacgaacactttcgtggcaggcacaccggc
ctgacctgttcggccagtccggtgttcgatccgcacggcgagctgctggcggtgctcgat
gtgtcttcggcgcgcccggacgtgtcgcgccagagccagtttcacaccatggccctggtc
aatctctcggcgaagatgatcgagagctgctatttcctgcgctacttcgagaaccagtgg
ctgctgcgttttcacctgcaggccgaatcggtcggtttgttcagcgaaggtttgctggcc
ttcgatggcgacgggcgaatctgcgcggtcaaccagagtgccttgaacctgcttggcact
attcgtggcggtgcgttgggcaagccggtggagatgtttttcgactgtgccctggatgag
ttgttcagccgtgccactacccatgccagtgccagttggccactgcgtacccgcgatggc
cgcttgctgtttgccagtttgcgggggcaggtgcgccagccggtgcagccttcgttgcca
acgccagcccctgccgccaaggtggaaaagacggggtcaatctgcctgctggatcctgcg
ctgcagaacgattttcgtcgtgccgtgcgggtattcgaacgtgatgtgccgttgttgatc
aatggtgaaaccggcagtggcaaggaggcctttgccaaggccgtgcaccaggccagccag
cgccgcgaccgggcgtttgtcgccttgaactgcgcctcgattccggaaagcctgatcgag
agcgagctgttcggttatcgcggtggcagctttaccggtgcgcgcaaggagggcatgcgc
ggcaagttgcagcaggctgatggcggcaccttgttgctggatgaaatcggtgacatgccc
ctggccctgcagacccgtctgttgcgggtgctggaagatcgcatggtggtgccgatcggt
ggcgagccgcaggcggtcaacgtgcgcatcatcagtgccacccaccgcaacctgctggag
cgggtagaggatggcagcttccgtgaagacctttattaccggctcaatggtctggagatc
gagttgccggccttgcgtgagcgtagtgacaagtcgcagctgcttgattttattctggct
gaggaggcgggcgagcagtcagtaacgctggagccctcggcacgccaggccttgctcgat
ttcgcctggccagggaacgtacggcagttgcgtaatgtgttgcgcacgttggtggcgctt
tgtgatgagggcgcaatcagcttcagagatttgccgagcattgtgggagcgggcttgccc
cgcgatagcggtctgtctgaaccaacgcctcgcggggcaagcccgctcccaccgttggag
gatgccgagcgcagtgcattgcttgcagccttggaacaacaacgctggcacatgacccat
gtagcagcccagttaggcgtcagccgcaataccttgtatcgaaaacttcgcaaacacggt
atcgcccggagcctttga
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